Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   GII77_RS02030 Genome accession   NZ_CP045825
Coordinates   376517..376915 (-) Length   132 a.a.
NCBI ID   WP_015252845.1    Uniprot ID   -
Organism   Bacillus subtilis strain 75     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 371517..381915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII77_RS01995 (GII77_01995) - 372396..372584 (+) 189 Protein_347 hypothetical protein -
  GII77_RS02000 (GII77_02000) - 372620..372935 (+) 316 Protein_348 RDD family protein -
  GII77_RS02005 (GII77_02005) yckD 373017..373349 (+) 333 WP_015252849.1 YckD family protein -
  GII77_RS02010 (GII77_02010) - 373477..373899 (+) 423 WP_174616579.1 MarR family transcriptional regulator -
  GII77_RS02015 (GII77_02015) - 373887..374228 (+) 342 WP_032724911.1 DUF3147 family protein -
  GII77_RS02020 (GII77_02020) - 374247..374974 (+) 728 Protein_352 AAA family ATPase -
  GII77_RS02025 (GII77_02025) bglC 375047..376480 (+) 1434 WP_015252846.1 6-phospho-beta-glucosidase -
  GII77_RS02030 (GII77_02030) nin/comJ 376517..376915 (-) 399 WP_015252845.1 DNA-entry nuclease inhibitor Regulator
  GII77_RS02035 (GII77_02035) nucA/comI 376942..377391 (-) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  GII77_RS02040 (GII77_02040) tlpC 377559..379280 (-) 1722 WP_015252843.1 methyl-accepting chemotaxis protein TlpC -
  GII77_RS02045 (GII77_02045) hxlB 379391..379948 (-) 558 WP_015252842.1 6-phospho-3-hexuloisomerase -
  GII77_RS02050 (GII77_02050) hxlA 379954..380586 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  GII77_RS02055 (GII77_02055) hxlR 380818..381180 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14935.86 Da        Isoelectric Point: 4.7078

>NTDB_id=398270 GII77_RS02030 WP_015252845.1 376517..376915(-) (nin/comJ) [Bacillus subtilis strain 75]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYETKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=398270 GII77_RS02030 WP_015252845.1 376517..376915(-) (nin/comJ) [Bacillus subtilis strain 75]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAACAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985

Multiple sequence alignment