Detailed information NTG0398193

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: GII78_RS02145
• Genome accession: NZ_CP045824
• Coordinates: 427092..428240 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain MB8_B10
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 422092..433240

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII78_RS02125 (GII78_02125)	yclH	422469..423149 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
GII78_RS02130 (GII78_02130)	yclI	423165..424625 (-)	1461	WP_015252826.1	ABC transporter permease	-
GII78_RS02135 (GII78_02135)	yclJ	424838..425521 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
GII78_RS02140 (GII78_02140)	yclK	425508..426929 (+)	1422	WP_113713032.1	two-component system sensor histidine kinase YclK	-
GII78_RS02145 (GII78_02145)	rapC	427092..428240 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
GII78_RS02150 (GII78_02150)	phrC	428224..428346 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
GII78_RS02155 (GII78_02155)	yczM	428446..428535 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
GII78_RS02160 (GII78_02160)	yczN	428617..428730 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
GII78_RS02165 (GII78_02165)	thrD	428884..430248 (-)	1365	WP_113713033.1	aspartate kinase	-
GII78_RS02170 (GII78_02170)	ceuB	430633..431583 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
GII78_RS02175 (GII78_02175)	yclO	431576..432523 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=398193 GII78_RS02145 WP_003246686.1 427092..428240(+) (rapC) [Bacillus subtilis strain MB8_B10]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=398193 GII78_RS02145 WP_003246686.1 427092..428240(+) (rapC) [Bacillus subtilis strain MB8_B10]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571