Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | GII79_RS13240 | Genome accession | NZ_CP045823 |
| Coordinates | 2544258..2545295 (-) | Length | 345 a.a. |
| NCBI ID | WP_029726718.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain MB8_B1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2539258..2550295
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII79_RS13190 (GII79_13190) | tasA | 2539355..2540140 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| GII79_RS13195 (GII79_13195) | sipW | 2540204..2540776 (-) | 573 | WP_072692741.1 | signal peptidase I SipW | - |
| GII79_RS13200 (GII79_13200) | tapA | 2540760..2541521 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| GII79_RS13205 (GII79_13205) | yqzG | 2541793..2542119 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| GII79_RS13210 (GII79_13210) | spoIITA | 2542161..2542340 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| GII79_RS13215 (GII79_13215) | comGG | 2542412..2542786 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| GII79_RS13220 (GII79_13220) | comGF | 2542787..2543170 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| GII79_RS13225 (GII79_13225) | comGE | 2543196..2543543 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| GII79_RS13230 (GII79_13230) | comGD | 2543527..2543958 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| GII79_RS13235 (GII79_13235) | comGC | 2543948..2544244 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
| GII79_RS13240 (GII79_13240) | comGB | 2544258..2545295 (-) | 1038 | WP_029726718.1 | comG operon protein ComGB | Machinery gene |
| GII79_RS13245 (GII79_13245) | comGA | 2545282..2546352 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| GII79_RS13250 (GII79_13250) | - | 2546565..2546762 (-) | 198 | WP_029726717.1 | hypothetical protein | - |
| GII79_RS13255 (GII79_13255) | corA | 2546764..2547717 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| GII79_RS13260 (GII79_13260) | yqhB | 2547860..2549188 (+) | 1329 | WP_029726716.1 | hemolysin family protein | - |
| GII79_RS13265 (GII79_13265) | rsbRD | 2549241..2550077 (-) | 837 | WP_003230149.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39702.10 Da Isoelectric Point: 9.6257
>NTDB_id=398152 GII79_RS13240 WP_029726718.1 2544258..2545295(-) (comGB) [Bacillus subtilis strain MB8_B1]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=398152 GII79_RS13240 WP_029726718.1 2544258..2545295(-) (comGB) [Bacillus subtilis strain MB8_B1]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |