Detailed information NTG0397935

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: GII82_RS19285
• Genome accession: NZ_CP045819
• Coordinates: 3741468..3742613 (+)
• Length: 381 a.a.
• NCBI ID: WP_015714890.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MB9_B4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3736468..3747613

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII82_RS19260 (GII82_19260)	albF	3736484..3737764 (+)	1281	WP_029726079.1	pitrilysin family protein	-
GII82_RS19265 (GII82_19265)	albG	3737761..3738462 (+)	702	WP_029726080.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
GII82_RS19270 (GII82_19270)	ywhL	3738468..3739844 (-)	1377	WP_015250987.1	YncE family protein	-
GII82_RS19275 (GII82_19275)	ywhK	3739883..3741238 (-)	1356	WP_003227552.1	YncE family protein	-
GII82_RS19285 (GII82_19285)	rapF	3741468..3742613 (+)	1146	WP_015714890.1	response regulator aspartate phosphatase RapF	Regulator
GII82_RS19290 (GII82_19290)	phrF	3742597..3742716 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
GII82_RS19295 (GII82_19295)	-	3742973..3743452 (+)	480	WP_015714892.1	hypothetical protein	-
GII82_RS19300 (GII82_19300)	-	3743601..3744389 (+)	789	WP_015714893.1	membrane protein	-
GII82_RS19305 (GII82_19305)	-	3744376..3745050 (+)	675	WP_015714894.1	hypothetical protein	-
GII82_RS19310 (GII82_19310)	-	3745060..3745857 (+)	798	WP_231573542.1	hypothetical protein	-
GII82_RS19315 (GII82_19315)	-	3745860..3746507 (+)	648	WP_015714896.1	ABC transporter ATP-binding protein	-
GII82_RS19320 (GII82_19320)	-	3746500..3747060 (+)	561	WP_029726083.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45571.01 Da
• Isoelectric Point: 4.9848

>NTDB_id=397935 GII82_RS19285 WP_015714890.1 3741468..3742613(+) (rapF) [Bacillus subtilis strain MB9_B4]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLNLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=397935 GII82_RS19285 WP_015714890.1 3741468..3742613(+) (rapF) [Bacillus subtilis strain MB9_B4]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTAATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTAAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572