Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | GII82_RS12400 | Genome accession | NZ_CP045819 |
| Coordinates | 2428470..2429507 (-) | Length | 345 a.a. |
| NCBI ID | WP_029726718.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain MB9_B4 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2423470..2434507
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII82_RS12350 (GII82_12350) | tasA | 2423567..2424352 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| GII82_RS12355 (GII82_12355) | sipW | 2424416..2424988 (-) | 573 | WP_072692741.1 | signal peptidase I SipW | - |
| GII82_RS12360 (GII82_12360) | tapA | 2424972..2425733 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| GII82_RS12365 (GII82_12365) | yqzG | 2426005..2426331 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| GII82_RS12370 (GII82_12370) | spoIITA | 2426373..2426552 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| GII82_RS12375 (GII82_12375) | comGG | 2426624..2426998 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| GII82_RS12380 (GII82_12380) | comGF | 2426999..2427382 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| GII82_RS12385 (GII82_12385) | comGE | 2427408..2427755 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| GII82_RS12390 (GII82_12390) | comGD | 2427739..2428170 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| GII82_RS12395 (GII82_12395) | comGC | 2428160..2428456 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
| GII82_RS12400 (GII82_12400) | comGB | 2428470..2429507 (-) | 1038 | WP_029726718.1 | comG operon protein ComGB | Machinery gene |
| GII82_RS12405 (GII82_12405) | comGA | 2429494..2430564 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| GII82_RS12410 (GII82_12410) | - | 2430777..2430974 (-) | 198 | WP_029726717.1 | hypothetical protein | - |
| GII82_RS12415 (GII82_12415) | corA | 2430976..2431929 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| GII82_RS12420 (GII82_12420) | yqhB | 2432072..2433400 (+) | 1329 | WP_029726716.1 | hemolysin family protein | - |
| GII82_RS12425 (GII82_12425) | rsbRD | 2433453..2434289 (-) | 837 | WP_003230149.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39702.10 Da Isoelectric Point: 9.6257
>NTDB_id=397906 GII82_RS12400 WP_029726718.1 2428470..2429507(-) (comGB) [Bacillus subtilis strain MB9_B4]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=397906 GII82_RS12400 WP_029726718.1 2428470..2429507(-) (comGB) [Bacillus subtilis strain MB9_B4]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |