Detailed information NTG0397905

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HRL54_RS00875
• Genome accession: NZ_CP054191
• Coordinates: 185992..186975 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain TH9F11
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 180992..191975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRL54_RS00860 (HRL54_00845)	dppA	182292..183899 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
HRL54_RS00865 (HRL54_00850)	dppB	184050..185069 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HRL54_RS00870 (HRL54_00855)	dppC	185079..185981 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HRL54_RS00875 (HRL54_00860)	amiE	185992..186975 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
HRL54_RS00880 (HRL54_00865)	dppF	186972..187976 (+)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HRL54_RS00885 (HRL54_00870)	yhjV	188006..189277 (-)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
HRL54_RS00890 (HRL54_00875)	-	189753..189860 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HRL54_RS00895 (HRL54_00880)	-	190236..190343 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HRL54_RS00900 (HRL54_00885)	-	190719..190826 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=397905 HRL54_RS00875 WP_001196496.1 185992..186975(+) (amiE) [Escherichia coli strain TH9F11]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=397905 HRL54_RS00875 WP_001196496.1 185992..186975(+) (amiE) [Escherichia coli strain TH9F11]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401