Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   GII83_RS16170 Genome accession   NZ_CP045818
Coordinates   3122693..3124990 (-) Length   765 a.a.
NCBI ID   WP_153912412.1    Uniprot ID   -
Organism   Bacillus subtilis strain MB9_B6     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3117693..3129990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII83_RS16130 (GII83_16130) mrpB 3118158..3118589 (+) 432 WP_038429537.1 Na(+)/H(+) antiporter subunit B -
  GII83_RS16135 (GII83_16135) mrpC 3118589..3118930 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  GII83_RS16140 (GII83_16140) mrpD 3118923..3120404 (+) 1482 WP_038429539.1 Na+/H+ antiporter subunit D -
  GII83_RS16145 (GII83_16145) mrpE 3120410..3120886 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  GII83_RS16150 (GII83_16150) mrpF 3120886..3121170 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  GII83_RS16155 (GII83_16155) mnhG 3121154..3121528 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  GII83_RS16160 (GII83_16160) yuxO 3121569..3121949 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  GII83_RS16165 (GII83_16165) comA 3121968..3122612 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  GII83_RS16170 (GII83_16170) comP 3122693..3124990 (-) 2298 WP_153912412.1 histidine kinase Regulator
  GII83_RS16175 (GII83_16175) comX 3124998..3125159 (-) 162 WP_049140565.1 competence pheromone ComX -
  GII83_RS16180 (GII83_16180) - 3125174..3126034 (-) 861 WP_040081966.1 polyprenyl synthetase family protein -
  GII83_RS16185 (GII83_16185) degQ 3126219..3126359 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  GII83_RS21320 - 3126581..3126643 (+) 63 Protein_3148 hypothetical protein -
  GII83_RS16190 (GII83_16190) - 3126821..3127189 (+) 369 WP_017695529.1 hypothetical protein -
  GII83_RS16195 (GII83_16195) pdeH 3127165..3128394 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88336.63 Da        Isoelectric Point: 8.3224

>NTDB_id=397843 GII83_RS16170 WP_153912412.1 3122693..3124990(-) (comP) [Bacillus subtilis strain MB9_B6]
MKSRNNKISVVLVVLSLIYVIYLTYISNNNLLVGATVSKGKNGDIVITNVDEFSMASYSGIEKGDIVKSINNKKINTNEI
KMNKLKNVSSMIVERNGHNLELKMTLFNDKNFTTYLIPLIFYIVCLFCCFFILKINESKNLLSAVVLIIFLLSASIAFIS
AGGSAKGDMLSRLIMVVTLISVPLNYLLFLYQYFKELGTKLFNKKVFILYLIPVINVVCEIFRSHLFFRDYVPKLNLLAF
FFLFIIVGVYFSIILIKNKDTEQAHIIKVLTIINIFSFSPFLCLYLIPYVFLNAHYVSSFLAASFMLLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPDSDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQMIRDSTSLSQVFEELKNTILEVSLVSRAHVYEVSADGNIKLYDDENVNSFEKVYQKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFD
QEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=397843 GII83_RS16170 WP_153912412.1 3122693..3124990(-) (comP) [Bacillus subtilis strain MB9_B6]
ATGAAGTCTAGAAATAACAAAATTTCTGTAGTGTTAGTTGTATTAAGTTTGATTTATGTTATTTATTTGACTTATATTAG
TAATAATAATTTATTAGTAGGGGCAACTGTCTCTAAAGGAAAAAATGGCGATATTGTAATTACCAATGTAGATGAATTTT
CAATGGCTTCATACAGCGGTATAGAAAAAGGAGATATCGTAAAGAGTATTAATAATAAAAAGATAAACACAAACGAAATA
AAAATGAACAAACTAAAAAATGTAAGTTCGATGATTGTGGAAAGAAATGGACATAATCTTGAGTTGAAAATGACCTTATT
TAATGATAAAAATTTCACTACTTACTTAATACCGTTAATATTTTATATTGTTTGTTTATTTTGTTGCTTTTTTATATTAA
AAATAAATGAATCAAAGAACCTTCTCTCAGCTGTAGTTTTAATTATCTTTCTGTTGTCTGCCTCTATTGCATTTATAAGT
GCTGGAGGGTCTGCTAAGGGAGATATGCTGAGCAGGCTTATAATGGTGGTAACATTAATATCTGTTCCGCTAAACTATCT
TCTCTTTCTTTATCAATATTTCAAAGAATTAGGAACCAAATTATTTAATAAGAAAGTTTTTATTTTATATTTGATTCCGG
TCATAAATGTAGTTTGTGAAATTTTTCGTTCACATCTTTTCTTTCGAGATTATGTTCCTAAATTAAATTTACTTGCTTTT
TTCTTTTTATTTATTATAGTAGGGGTTTATTTTAGTATCATACTAATTAAAAATAAAGACACTGAACAAGCACATATTAT
TAAGGTTCTCACTATCATTAATATCTTTTCTTTTTCGCCTTTTCTGTGTTTATATTTGATACCTTACGTGTTTTTAAATG
CACATTATGTTTCTTCTTTTTTAGCGGCTTCATTTATGCTGTTGATACCATTCTCATTGGTATTTCAATTCATGACAAAT
AAAATCTATAATGTAGATTTTATTTTAAGCAGATTAAGGTACTATGGCTTTTTAGCTCTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTAATTAGTAGTCCTGATAGTGATTTTTATAGTGTTAAACTAACCTTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTCTCAGAAAAATTCAATTATCAAGAC
AGTATATATAAATTCACGCAGATGATAAGAGACTCTACTTCCCTATCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTTTCTCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGGAAATATTAAACTATATGATGATGAGAACG
TAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAATAAA
GGCTTTGTCATGAAAATAGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCGTCT
CACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATCGAG
GAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTGTGA
GCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTCGGATTGGTG
AAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCACATTCGTTTAAATACCGGGAGATTTACGGC
TTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGG
CGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTTGGGTTTGAT
CAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.067

100

0.596


Multiple sequence alignment