Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   HR084_RS00220 Genome accession   NZ_CP054177
Coordinates   41331..42158 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain JCL16     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36331..47158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HR084_RS00195 (HR084_00195) efpO 37394..38836 (+) 1443 WP_080528820.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  HR084_RS00200 (HR084_00200) tmk 38833..39471 (+) 639 WP_080528821.1 dTMP kinase -
  HR084_RS00205 (HR084_00205) darA 39545..39874 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  HR084_RS00210 (HR084_00210) yaaR 39887..40327 (+) 441 WP_009966249.1 YaaR family protein -
  HR084_RS00215 (HR084_00215) holB 40339..41328 (+) 990 WP_003244417.1 DNA polymerase III subunit delta' -
  HR084_RS00220 (HR084_00220) yaaT 41331..42158 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  HR084_RS00225 (HR084_00225) yabA 42173..42532 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  HR084_RS00230 (HR084_00230) trmNF 42591..43334 (+) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  HR084_RS00235 (HR084_00235) yazA 43321..43620 (+) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  HR084_RS00240 (HR084_00240) rsmI 43595..44473 (+) 879 WP_173613853.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  HR084_RS00245 (HR084_00245) abrB 44522..44812 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=397753 HR084_RS00220 WP_003226767.1 41331..42158(+) (yaaT) [Bacillus subtilis strain JCL16]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=397753 HR084_RS00220 WP_003226767.1 41331..42158(+) (yaaT) [Bacillus subtilis strain JCL16]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTCCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGCCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996

Multiple sequence alignment