Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   GII86_RS06305 Genome accession   NZ_CP045816
Coordinates   1216368..1216559 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain P5_B2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1211368..1221559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII86_RS06275 (GII86_06275) argF 1212231..1213190 (+) 960 WP_046160277.1 ornithine carbamoyltransferase -
  GII86_RS06280 (GII86_06280) yjzC 1213276..1213455 (+) 180 WP_003245356.1 YjzC family protein -
  GII86_RS06285 (GII86_06285) yjzD 1213502..1213687 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  GII86_RS06290 (GII86_06290) - 1213936..1214670 (+) 735 WP_003245223.1 hypothetical protein -
  GII86_RS06295 (GII86_06295) - 1214752..1215309 (+) 558 WP_046160278.1 hypothetical protein -
  GII86_RS06300 (GII86_06300) med 1215400..1216353 (+) 954 WP_041351863.1 transcriptional regulator Med Regulator
  GII86_RS06305 (GII86_06305) comZ 1216368..1216559 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  GII86_RS06310 (GII86_06310) yjzB 1216589..1216825 (-) 237 WP_072173825.1 spore coat protein YjzB -
  GII86_RS06315 (GII86_06315) fabH 1216990..1217928 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  GII86_RS06320 (GII86_06320) fabF 1217951..1219192 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  GII86_RS06325 (GII86_06325) yjaZ 1219268..1220053 (+) 786 WP_021479557.1 DUF2268 domain-containing protein -
  GII86_RS06330 (GII86_06330) appD 1220245..1221231 (+) 987 WP_046160279.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=397643 GII86_RS06305 WP_003224559.1 1216368..1216559(+) (comZ) [Bacillus subtilis strain P5_B2]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=397643 GII86_RS06305 WP_003224559.1 1216368..1216559(+) (comZ) [Bacillus subtilis strain P5_B2]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment