Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GII86_RS02390 Genome accession   NZ_CP045816
Coordinates   461676..462626 (+) Length   316 a.a.
NCBI ID   WP_015382768.1    Uniprot ID   -
Organism   Bacillus subtilis strain P5_B2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 456676..467626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII86_RS02365 (GII86_02365) rapC 458136..459284 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  GII86_RS02370 (GII86_02370) phrC 459268..459390 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  GII86_RS02375 (GII86_02375) yczM 459490..459579 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  GII86_RS02380 (GII86_02380) yczN 459661..459774 (-) 114 WP_032678937.1 YjcZ family sporulation protein -
  GII86_RS02385 (GII86_02385) thrD 459927..461291 (-) 1365 WP_032726529.1 aspartate kinase -
  GII86_RS02390 (GII86_02390) ceuB 461676..462626 (+) 951 WP_015382768.1 petrobactin ABC transporter permease YclN Machinery gene
  GII86_RS02395 (GII86_02395) yclO 462619..463566 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  GII86_RS02400 (GII86_02400) yclP 463560..464318 (+) 759 WP_046160055.1 petrobactin ABC transporter ATP-binding protein YclP -
  GII86_RS02405 (GII86_02405) yclQ 464340..465293 (+) 954 WP_046160056.1 petrobactin ABC transporter substrate-binding protein YclQ -
  GII86_RS02410 (GII86_02410) cdaE 465340..466758 (-) 1419 WP_046160057.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=397633 GII86_RS02390 WP_015382768.1 461676..462626(+) (ceuB) [Bacillus subtilis strain P5_B2]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLIAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=397633 GII86_RS02390 WP_015382768.1 461676..462626(+) (ceuB) [Bacillus subtilis strain P5_B2]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACAACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCGGCCAGTCCTTTAATCAAAATGCT
GATCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment