Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   GII89_RS06235 Genome accession   NZ_CP045812
Coordinates   1207183..1207374 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain P8_B3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1202183..1212374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII89_RS06205 (GII89_06205) argF 1203047..1204006 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  GII89_RS06210 (GII89_06210) yjzC 1204092..1204271 (+) 180 WP_003245356.1 YjzC family protein -
  GII89_RS06215 (GII89_06215) yjzD 1204317..1204502 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  GII89_RS06220 (GII89_06220) - 1204751..1205485 (+) 735 WP_003245223.1 hypothetical protein -
  GII89_RS06225 (GII89_06225) - 1205567..1206124 (+) 558 WP_003232974.1 hypothetical protein -
  GII89_RS06230 (GII89_06230) med 1206215..1207168 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  GII89_RS06235 (GII89_06235) comZ 1207183..1207374 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  GII89_RS06240 (GII89_06240) yjzB 1207404..1207643 (-) 240 WP_003232972.1 spore coat protein YjzB -
  GII89_RS06245 (GII89_06245) fabH 1207808..1208746 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  GII89_RS06250 (GII89_06250) fabF 1208769..1210010 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  GII89_RS06255 (GII89_06255) yjaZ 1210086..1210871 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  GII89_RS06260 (GII89_06260) appD 1211063..1212049 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=397490 GII89_RS06235 WP_003224559.1 1207183..1207374(+) (comZ) [Bacillus subtilis strain P8_B3]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=397490 GII89_RS06235 WP_003224559.1 1207183..1207374(+) (comZ) [Bacillus subtilis strain P8_B3]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment