Detailed information NTG0397489

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: GII89_RS06230
• Genome accession: NZ_CP045812
• Coordinates: 1206215..1207168 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis strain P8_B3
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1201215..1212168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII89_RS06205 (GII89_06205)	argF	1203047..1204006 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
GII89_RS06210 (GII89_06210)	yjzC	1204092..1204271 (+)	180	WP_003245356.1	YjzC family protein	-
GII89_RS06215 (GII89_06215)	yjzD	1204317..1204502 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
GII89_RS06220 (GII89_06220)	-	1204751..1205485 (+)	735	WP_003245223.1	hypothetical protein	-
GII89_RS06225 (GII89_06225)	-	1205567..1206124 (+)	558	WP_003232974.1	hypothetical protein	-
GII89_RS06230 (GII89_06230)	med	1206215..1207168 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
GII89_RS06235 (GII89_06235)	comZ	1207183..1207374 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
GII89_RS06240 (GII89_06240)	yjzB	1207404..1207643 (-)	240	WP_003232972.1	spore coat protein YjzB	-
GII89_RS06245 (GII89_06245)	fabH	1207808..1208746 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
GII89_RS06250 (GII89_06250)	fabF	1208769..1210010 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
GII89_RS06255 (GII89_06255)	yjaZ	1210086..1210871 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
GII89_RS06260 (GII89_06260)	appD	1211063..1212049 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=397489 GII89_RS06230 WP_003245494.1 1206215..1207168(+) (med) [Bacillus subtilis strain P8_B3]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=397489 GII89_RS06230 WP_003245494.1 1206215..1207168(+) (med) [Bacillus subtilis strain P8_B3]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1