Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   HRD51_RS23360 Genome accession   NZ_CP054019
Coordinates   5209892..5211013 (-) Length   373 a.a.
NCBI ID   WP_205366134.1    Uniprot ID   -
Organism   Streptomyces sp. A1-5     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5204892..5216013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRD51_RS23340 (HRD51_23005) - 5205783..5206742 (-) 960 WP_235094014.1 A/G-specific adenine glycosylase -
  HRD51_RS23345 (HRD51_23010) - 5206923..5207582 (+) 660 WP_235094015.1 pyridoxamine 5'-phosphate oxidase family protein -
  HRD51_RS23350 (HRD51_23015) - 5207894..5208721 (+) 828 WP_235094016.1 hypothetical protein -
  HRD51_RS23355 (HRD51_23020) - 5208850..5209848 (+) 999 WP_235094017.1 NAD-dependent epimerase/dehydratase family protein -
  HRD51_RS23360 (HRD51_23025) disA 5209892..5211013 (-) 1122 WP_205366134.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  HRD51_RS23365 (HRD51_23030) radA/sms 5211146..5212558 (-) 1413 WP_235094018.1 DNA repair protein RadA Machinery gene
  HRD51_RS23370 (HRD51_23035) - 5212786..5214543 (+) 1758 WP_235094019.1 sigma-70 family RNA polymerase sigma factor -
  HRD51_RS23375 (HRD51_23040) - 5214568..5215434 (-) 867 WP_039634085.1 hypothetical protein -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 40257.09 Da        Isoelectric Point: 4.9340

>NTDB_id=397216 HRD51_RS23360 WP_205366134.1 5209892..5211013(-) (disA) [Streptomyces sp. A1-5]
MAANDRASSPGRSAGTGTESLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVESMCTGGFVLDVEFTATRLRE
LCKLDGALVLDKDITKILRAGVQLVPDASIPTEETGTRHRTAQRVSIQTNFPVVSVSQSMRLIALYVDGERRVLEESAAI
LSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLEELIAG
VEPERELVARDYVPEPTAKRSRTVAEALAELDALTHPELLELPIVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGAV
IDRLVDHFGGLQKLLAASVDDLQAVEGVGETRARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=397216 HRD51_RS23360 WP_205366134.1 5209892..5211013(-) (disA) [Streptomyces sp. A1-5]
GTGGCAGCGAACGACCGGGCGTCGTCTCCCGGCAGGTCCGCAGGGACCGGCACCGAGAGCCTGATGCGCGCCTCGCTGAG
CGCCGTCGCGCCCGGTACGGCCCTGCGGGACGGCCTGGAACGCATCCTCCGCGGCAACACGGGCGGCCTGATCGTCCTCG
GCTTCGACAAGACCGTCGAGTCCATGTGCACCGGCGGCTTCGTCCTCGACGTCGAGTTCACCGCGACCCGCCTGCGCGAG
CTGTGCAAGCTCGACGGCGCGCTGGTCCTCGACAAGGACATCACCAAGATCCTCCGGGCCGGGGTCCAGCTGGTGCCGGA
CGCCTCGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACCGCCCAGCGGGTCTCCATCCAGACCAACTTCCCGGTGG
TCTCGGTCAGCCAGTCCATGCGCCTGATCGCGCTCTACGTGGACGGCGAGCGCCGCGTCCTGGAGGAGTCCGCCGCGATC
CTCTCCCGCGCCAACCAGGCGCTGGCCACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCCGGCACCCTCTCCGC
CCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTCTCCGCGGTCGCCCAGCGCCTGGAGATGGTCCGCCGGATCGCCA
CCGAGATCGCCGAGTACGTCGTCGAACTGGGCACCGACGGCCGCCTGCTGACCCTCCAGCTCGAAGAGCTGATCGCCGGG
GTGGAGCCGGAGCGCGAGCTGGTCGCCCGGGACTACGTCCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGCCGAGGC
ACTGGCCGAGCTGGACGCCCTCACCCACCCCGAGCTGCTCGAACTCCCCATAGTGGCCCGCGCGTTGGGCTACAGCGGCT
CGCCCGAGACGCTGGACTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTCCCCCGCCTCCCCGGCGCCGTC
ATCGACCGCCTGGTCGACCACTTCGGCGGCCTCCAGAAGCTCCTCGCCGCCAGCGTCGACGACCTCCAGGCGGTCGAGGG
TGTCGGCGAGACCCGCGCCCGCTCGGTCCGCGAGGGCCTCTCCCGCCTGGCGGAGTCGTCGATCCTGGAGCGGTACGTCT
AG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.818

95.71

0.429


Multiple sequence alignment