Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   FOC63_RS09735 Genome accession   NZ_CP054015
Coordinates   1943485..1944147 (-) Length   220 a.a.
NCBI ID   WP_012961975.1    Uniprot ID   -
Organism   Streptococcus gallolyticus strain FDAARGOS_755     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1938485..1949147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC63_RS11365 - 1938889..1939449 (+) 561 WP_009854189.1 ABC transporter ATP-binding protein -
  FOC63_RS11370 - 1939437..1940282 (+) 846 WP_009854190.1 ATP-binding cassette domain-containing protein -
  FOC63_RS09720 (FOC63_09720) xerS 1940601..1941671 (+) 1071 WP_003064732.1 tyrosine recombinase XerS Machinery gene
  FOC63_RS09725 (FOC63_09725) - 1941777..1942457 (-) 681 WP_009854191.1 LexA family transcriptional regulator -
  FOC63_RS09730 (FOC63_09730) - 1942541..1943488 (-) 948 WP_009854192.1 sensor histidine kinase -
  FOC63_RS09735 (FOC63_09735) braR 1943485..1944147 (-) 663 WP_012961975.1 response regulator transcription factor Regulator
  FOC63_RS09740 (FOC63_09740) - 1944235..1946214 (-) 1980 WP_009854194.1 FtsX-like permease family protein -
  FOC63_RS09745 (FOC63_09745) - 1946216..1946968 (-) 753 WP_009854195.1 ABC transporter ATP-binding protein -
  FOC63_RS09750 (FOC63_09750) ltrA 1947494..1948771 (-) 1278 WP_009855238.1 group II intron reverse transcriptase/maturase -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25434.10 Da        Isoelectric Point: 4.8371

>NTDB_id=397166 FOC63_RS09735 WP_012961975.1 1943485..1944147(-) (braR) [Streptococcus gallolyticus strain FDAARGOS_755]
MKQGKIYIVEDDETIVKLLKQHLSQTYDVFSVTNFRAIKQEVEEIKPDLILIDITLPYFNGFYWTTEIRKTMTLPIIFIS
SSDDEMDTVMALNMGGDDFVSKPFSLTILDAKISAFLRRAYQFTSDNYQLDQFSLSRDGILSNGDDHITLSPTENKILAV
LFEHQNQVVPKEELLEKLWENESFIDQNTLSVNITRLRKKTQPLGFDRIHTVRGVGYLLK

Nucleotide


Download         Length: 663 bp        

>NTDB_id=397166 FOC63_RS09735 WP_012961975.1 1943485..1944147(-) (braR) [Streptococcus gallolyticus strain FDAARGOS_755]
ATGAAACAAGGAAAGATTTATATTGTCGAGGACGATGAAACTATCGTTAAACTTTTAAAACAACATCTTAGTCAAACTTA
TGATGTCTTTAGTGTCACTAATTTTCGAGCTATCAAGCAGGAAGTCGAAGAAATCAAACCTGACCTTATCCTGATTGATA
TCACGTTGCCGTATTTTAATGGTTTTTATTGGACAACAGAAATTCGTAAAACCATGACATTGCCGATTATTTTTATCTCA
TCTAGTGATGATGAAATGGATACTGTCATGGCACTTAACATGGGAGGGGATGATTTTGTGTCAAAACCATTTTCTCTAAC
GATTTTAGACGCCAAAATTTCAGCCTTTTTAAGACGTGCTTACCAGTTTACCTCGGATAATTACCAATTGGACCAGTTTT
CTCTGTCGCGTGACGGAATTTTATCAAACGGTGACGACCATATCACCTTATCTCCGACAGAAAATAAGATTTTAGCGGTT
CTCTTTGAACATCAAAATCAAGTCGTGCCCAAAGAGGAATTACTCGAGAAACTTTGGGAAAATGAAAGTTTCATTGACCA
AAATACCCTTAGCGTTAACATAACACGACTGCGCAAGAAAACACAACCATTAGGTTTTGATCGTATTCACACCGTGAGAG
GAGTTGGCTACCTTCTAAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-219)

Response regulator receiver domain (Response_reg)

(6-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

46.33

99.091

0.459
  vicR Streptococcus mutans UA159

34.322

100

0.368