Detailed information NTG0397105

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FOC63_RS03850
• Genome accession: NZ_CP054015
• Coordinates: 787508..788602 (+)
• Length: 364 a.a.
• NCBI ID: WP_009855213.1
• Uniprot ID: -
• Organism: Streptococcus gallolyticus strain FDAARGOS_755
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 782508..793602

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC63_RS03825 (FOC63_03825)	pgsA	782933..783487 (-)	555	WP_009855208.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
FOC63_RS03830 (FOC63_03830)	-	783497..784441 (-)	945	WP_009855209.1	helix-turn-helix domain-containing protein	-
FOC63_RS03835 (FOC63_03835)	yfmH	784505..785794 (-)	1290	WP_009855210.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
FOC63_RS03840 (FOC63_03840)	yfmF	785795..787039 (-)	1245	WP_009855211.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
FOC63_RS03845 (FOC63_03845)	yaaA	787128..787505 (+)	378	WP_012962646.1	S4 domain-containing protein YaaA	-
FOC63_RS03850 (FOC63_03850)	recF	787508..788602 (+)	1095	WP_009855213.1	DNA replication/repair protein RecF	Machinery gene
FOC63_RS03855 (FOC63_03855)	-	788665..789531 (-)	867	WP_009855214.1	GRP family sugar transporter	-
FOC63_RS03860 (FOC63_03860)	guaB	789771..791252 (-)	1482	WP_009855215.1	IMP dehydrogenase	-
FOC63_RS03865 (FOC63_03865)	trpS	791513..792535 (-)	1023	WP_009855216.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41763.80 Da
• Isoelectric Point: 6.9437

>NTDB_id=397105 FOC63_RS03850 WP_009855213.1 787508..788602(+) (recF) [Streptococcus gallolyticus strain FDAARGOS_755]
MWIQKITLKNYRNYLTSELEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRTDKELIHFDAKELLVSGILQRSSGT
VPLDISLSSKGRVTKVNHLKQAKLSDYIGVMTVVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPIYLADLSNYNHVLKQR
NTYLKTAEKVDTDFLAVLDEQLADFGSRVMEHRLDFISNLEKEADRYHYAISNGVEHLSIHYLSSVSFQEKDDIKPNFLK
ALQKNHQRDIFKKNTSVGPHRDDLEFFINDMPANFGSQGQHRSLILSLKMAEIELIKTVTGDYPILLLDDVMSELDNYRQ
TELLKMIIDKNVQTFITTTSLDHLSQLPDELKIFTVNQGNIQEN

Nucleotide

• Length: 1095 bp

>NTDB_id=397105 FOC63_RS03850 WP_009855213.1 787508..788602(+) (recF) [Streptococcus gallolyticus strain FDAARGOS_755]
ATGTGGATTCAAAAAATAACGTTAAAAAATTATCGTAACTATCTGACTAGTGAGCTTGAATTTTCTCCTGGACTTAATGT
TTTCATCGGAAAAAACGCTCAAGGAAAGACAAATTTCTTAGAAGCAATTTATTTCCTTTCTCTTACCCGCAGCCACCGCA
CACGAACAGACAAAGAGTTGATTCATTTTGATGCCAAAGAACTTCTGGTTTCTGGTATTTTACAACGTTCAAGTGGTACT
GTTCCTTTAGATATTAGTCTTTCAAGTAAGGGACGTGTTACAAAAGTTAATCATCTAAAACAAGCTAAGTTATCAGACTA
TATTGGTGTAATGACCGTTGTTCTTTTTGCACCTGAAGATTTACAACTCATCAAAGGCGCTCCAAGCCTTCGTCGAAAAT
TTATTGACATTGATTTAGGGCAAATAAAGCCGATTTATTTAGCTGATTTGTCTAATTATAACCACGTGCTAAAACAGCGT
AATACTTATCTTAAAACGGCTGAAAAAGTTGATACTGATTTTTTAGCTGTGCTTGATGAGCAATTAGCTGATTTTGGTAG
CCGTGTCATGGAACATCGTTTAGATTTCATTTCTAATTTAGAAAAAGAAGCCGACCGCTATCATTATGCCATTTCAAACG
GCGTTGAACATCTTAGTATCCATTATCTGTCATCTGTTTCCTTCCAAGAAAAGGATGACATTAAGCCAAATTTCTTAAAA
GCTTTACAAAAAAATCATCAGCGTGATATTTTCAAAAAGAATACAAGTGTTGGTCCCCACCGTGATGATTTAGAATTTTT
CATCAATGATATGCCAGCAAATTTTGGCAGCCAAGGTCAGCACCGTAGCCTAATCTTATCACTAAAAATGGCTGAAATTG
AGTTAATAAAAACAGTAACTGGTGATTATCCTATTTTACTTTTAGATGATGTCATGAGCGAGCTTGATAATTACAGACAA
ACCGAACTCTTAAAAATGATTATTGATAAAAACGTTCAAACCTTCATTACAACAACAAGCCTCGACCACCTATCACAGCT
TCCGGACGAGTTAAAAATCTTTACAGTTAATCAAGGTAACATTCAAGAAAATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	64.835	100	0.648
recF	Bacillus subtilis subsp. subtilis str. 168	46.705	95.879	0.448