Detailed information NTG0039709

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: TTJL18_RS00625
• Genome accession: NC_017587
• Coordinates: 116620..117687 (+)
• Length: 355 a.a.
• NCBI ID: WP_014628896.1
• Uniprot ID: -
• Organism: Thermus thermophilus JL-18
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 111620..122687

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TTJL18_RS00605 (TtJL18_0118)	-	112135..112917 (+)	783	WP_014628894.1	RNA methyltransferase	-
TTJL18_RS00610 (TtJL18_0119)	groES	113015..113320 (+)	306	WP_011174076.1	co-chaperone GroES	-
TTJL18_RS00615 (TtJL18_0120)	groL	113333..114964 (+)	1632	WP_011174077.1	chaperonin GroEL	-
TTJL18_RS00620 (TtJL18_0121)	-	115028..116560 (-)	1533	WP_014628895.1	thermostable carboxypeptidase 1	-
TTJL18_RS00625 (TtJL18_0122)	pilD	116620..117687 (+)	1068	WP_014628896.1	A24 family peptidase	Machinery gene
TTJL18_RS00630 (TtJL18_0123)	-	117716..118225 (+)	510	WP_014628897.1	DUF2939 domain-containing protein	-
TTJL18_RS00635 (TtJL18_0124)	-	118239..119159 (+)	921	WP_014628898.1	nitroreductase family protein	-
TTJL18_RS00640 (TtJL18_0125)	-	119113..119889 (-)	777	WP_014628899.1	C40 family peptidase	-
TTJL18_RS00645 (TtJL18_0126)	-	119890..120648 (-)	759	WP_014628900.1	DUF721 domain-containing protein	-
TTJL18_RS00650 (TtJL18_0127)	recF	120633..121664 (-)	1032	WP_014628901.1	DNA replication/repair protein RecF	Machinery gene

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38084.51 Da
• Isoelectric Point: 8.4420

>NTDB_id=39709 TTJL18_RS00625 WP_014628896.1 116620..117687(+) (pilD) [Thermus thermophilus JL-18]
MWPLFALFLGLAVGSFLNVVIHRLPRGESVVYPPSRCPQCGHRLGPWDLVPVLSYLALKGRCRYCARPISPRYPLVEALT
GGLFLLASLFYPPGVEALLVFLFLAFLVALAFIDVDTFELPDPLTYGLLFLGLLASWALAFPLPFRESLDGSLMAAGGLA
LVAGYGNFFLRRFKEGRAEVPVGPHQVHMAALFGALLGPGVGMALAFLTWALSGRTGRPVVLPDRLTLLLLPLSLLLAPL
LGLDFLVSLKGALLAAGGLALAGGLYWAFRPLPEEGEEEPVAMGYGDVKLLGALGAWLGPYAFLALFLGVFAGALVGLLL
RQRKLPFGPYLALGGVVAFFFGETIWGAYLRLLGF

Nucleotide

• Length: 1068 bp

>NTDB_id=39709 TTJL18_RS00625 WP_014628896.1 116620..117687(+) (pilD) [Thermus thermophilus JL-18]
ATGTGGCCCCTTTTTGCCCTGTTCCTCGGCCTCGCGGTGGGCTCCTTTCTGAACGTGGTCATCCACCGCCTGCCCCGGGG
GGAGTCCGTCGTCTACCCCCCGTCCCGCTGCCCCCAGTGCGGCCACCGCCTGGGGCCTTGGGACCTGGTCCCCGTCCTCT
CCTACCTCGCCCTAAAGGGGCGGTGCCGCTACTGCGCCCGTCCCATCTCCCCCCGCTACCCCCTGGTGGAGGCCCTCACG
GGGGGGCTTTTTCTCCTCGCAAGCCTCTTCTACCCCCCTGGGGTGGAGGCCCTCTTGGTCTTCCTCTTCCTCGCCTTTCT
CGTGGCCCTCGCCTTCATTGACGTGGACACCTTTGAGCTTCCCGATCCCCTCACCTACGGCCTCCTCTTCCTTGGGCTTT
TGGCCTCCTGGGCGCTGGCCTTCCCCCTTCCCTTTAGGGAGAGCCTGGACGGAAGCCTCATGGCCGCCGGGGGGCTCGCC
CTGGTGGCGGGTTACGGGAACTTTTTCCTGAGGCGCTTTAAGGAGGGGAGGGCCGAGGTTCCCGTGGGGCCCCACCAGGT
CCACATGGCGGCCCTCTTCGGGGCCCTTTTGGGCCCGGGGGTGGGGATGGCCCTGGCCTTCCTCACCTGGGCCCTTTCGG
GGCGCACCGGAAGGCCGGTGGTCCTCCCGGACCGCCTCACCCTGCTCCTTCTGCCCCTCTCCCTCCTCCTCGCCCCCCTC
TTGGGCCTGGACTTCCTGGTGAGCCTCAAAGGGGCCCTCCTCGCCGCCGGGGGGCTCGCCCTCGCCGGGGGGCTTTACTG
GGCCTTTAGGCCCCTTCCCGAGGAAGGGGAAGAAGAGCCCGTGGCCATGGGCTACGGGGACGTGAAGCTTCTGGGGGCCT
TAGGGGCCTGGCTTGGGCCCTACGCTTTCCTGGCCCTTTTCCTCGGGGTCTTCGCCGGAGCCCTTGTGGGCCTTCTCCTT
AGGCAAAGGAAGCTTCCCTTCGGCCCCTACCTGGCCCTTGGGGGGGTGGTGGCCTTCTTCTTCGGGGAGACCATCTGGGG
AGCTTACCTTCGCCTTTTGGGCTTTTGA

Domains

Predicted by InterProScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (9-88)

• Type IV leader peptidase family (Peptidase_A24) (102-201)

• Type IV leader peptidase family (Peptidase_A24) (222-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.864	100	0.473