Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   FOC71_RS01440 Genome accession   NZ_CP053999
Coordinates   268140..268580 (+) Length   146 a.a.
NCBI ID   WP_003075326.1    Uniprot ID   -
Organism   Streptococcus intermedius strain FDAARGOS_769     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 263140..273580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC71_RS01400 (FOC71_01400) - 263249..263485 (+) 237 WP_003075314.1 hypothetical protein -
  FOC71_RS01405 (FOC71_01405) - 263482..263817 (+) 336 WP_003075316.1 hypothetical protein -
  FOC71_RS01410 (FOC71_01410) - 263819..264088 (+) 270 WP_003075318.1 hypothetical protein -
  FOC71_RS01415 (FOC71_01415) - 264097..264909 (+) 813 WP_003075320.1 phage replisome organizer N-terminal domain-containing protein -
  FOC71_RS01420 (FOC71_01420) - 264924..265775 (+) 852 WP_003075322.1 ATP-binding protein -
  FOC71_RS01425 (FOC71_01425) - 266081..266464 (+) 384 WP_268928584.1 ArpU family phage packaging/lysis transcriptional regulator -
  FOC71_RS09780 - 266745..266858 (+) 114 Protein_269 phage terminase small subunit P27 family -
  FOC71_RS01430 (FOC71_01430) - 266993..267184 (+) 192 WP_003038349.1 type II toxin-antitoxin system HicA family toxin -
  FOC71_RS01435 (FOC71_01435) - 267221..267601 (+) 381 WP_003038371.1 type II toxin-antitoxin system HicB family antitoxin -
  FOC71_RS01440 (FOC71_01440) brsR 268140..268580 (+) 441 WP_003075326.1 LytTR family DNA-binding domain-containing protein Regulator
  FOC71_RS01445 (FOC71_01445) - 268577..269035 (+) 459 WP_003075329.1 DUF3021 domain-containing protein -
  FOC71_RS01450 (FOC71_01450) hexA 269177..271735 (-) 2559 WP_003075333.1 DNA mismatch repair protein MutS Machinery gene
  FOC71_RS01455 (FOC71_01455) argR 271898..272338 (-) 441 WP_003075336.1 arginine repressor -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16911.67 Da        Isoelectric Point: 7.3971

>NTDB_id=396983 FOC71_RS01440 WP_003075326.1 268140..268580(+) (brsR) [Streptococcus intermedius strain FDAARGOS_769]
MKVQMHIDEKFSEEKIIIEAPVLSDSVQQLLTFAQHIGKNKTIRAKKEEEIYLLNSTEIQRVYTENRQVWAETATDAYLL
GLPLYQVLELLPTDFLQISQSEIINIKHIDHLKLTGSGLIQIAMKNGQITYSSRRYLKVIKEKLQL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=396983 FOC71_RS01440 WP_003075326.1 268140..268580(+) (brsR) [Streptococcus intermedius strain FDAARGOS_769]
ATGAAAGTTCAAATGCATATTGACGAAAAATTTTCAGAAGAAAAGATCATTATTGAAGCACCTGTTTTGTCGGATTCCGT
TCAACAACTACTAACATTTGCTCAACATATCGGTAAAAATAAAACCATTCGAGCAAAAAAAGAGGAGGAAATTTACCTAC
TAAATAGCACGGAGATACAACGCGTCTATACTGAAAATCGGCAAGTTTGGGCCGAAACAGCAACAGACGCTTATCTCTTA
GGGCTTCCACTTTATCAAGTTTTGGAATTGCTTCCCACTGATTTTCTACAGATTTCCCAATCTGAAATCATTAACATCAA
ACATATCGATCATCTGAAATTGACTGGTAGTGGTCTGATTCAGATTGCAATGAAAAACGGTCAGATAACTTATTCATCTC
GCCGTTATCTCAAAGTCATAAAGGAGAAATTACAGCTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.301

100

0.363

Multiple sequence alignment