Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GH769_RS23005 Genome accession   NZ_CP045767
Coordinates   5039891..5040298 (-) Length   135 a.a.
NCBI ID   WP_014720321.1    Uniprot ID   A0A0R3C615
Organism   Pseudomonas sp. CFSAN084952     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5034891..5045298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GH769_RS22990 (GH769_22990) - 5036895..5038946 (-) 2052 WP_020301916.1 methyl-accepting chemotaxis protein -
  GH769_RS22995 (GH769_22995) - 5038943..5039467 (-) 525 WP_020301917.1 chemotaxis protein CheW -
  GH769_RS23000 (GH769_23000) pilH 5039479..5039844 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  GH769_RS23005 (GH769_23005) pilG 5039891..5040298 (-) 408 WP_014720321.1 twitching motility response regulator PilG Regulator
  GH769_RS23010 (GH769_23010) gshB 5040538..5041491 (+) 954 WP_020301918.1 glutathione synthase -
  GH769_RS23015 (GH769_23015) - 5041569..5042474 (+) 906 WP_014720322.1 energy transducer TonB -
  GH769_RS23020 (GH769_23020) - 5042648..5043217 (+) 570 WP_019817750.1 YqgE/AlgH family protein -
  GH769_RS23025 (GH769_23025) ruvX 5043217..5043654 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  GH769_RS23030 (GH769_23030) pyrR 5043787..5044293 (+) 507 WP_019817751.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14924.48 Da        Isoelectric Point: 7.3841

>NTDB_id=396953 GH769_RS23005 WP_014720321.1 5039891..5040298(-) (pilG) [Pseudomonas sp. CFSAN084952]
MEQHSNALKVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=396953 GH769_RS23005 WP_014720321.1 5039891..5040298(-) (pilG) [Pseudomonas sp. CFSAN084952]
ATGGAACAGCATTCCAACGCCTTGAAGGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACATGGGGTGCGAGGTCATCACGGCGATCGACGGTTTCGACGCCCTGGCTCGTATTGTCGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGGGCGATCAAGGCCTATGTGCCTGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0R3C615

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72

92.593

0.667
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment