Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   FOC73_RS01910 Genome accession   NZ_CP053998
Coordinates   417596..418276 (-) Length   226 a.a.
NCBI ID   WP_002885340.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 412596..423276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS01890 (FOC73_01890) - 413149..413643 (-) 495 WP_002885314.1 YkgJ family cysteine cluster protein -
  FOC73_RS01895 (FOC73_01895) - 413727..415727 (-) 2001 WP_002885375.1 ABC transporter permease -
  FOC73_RS01900 (FOC73_01900) - 415729..416487 (-) 759 WP_002885325.1 ABC transporter ATP-binding protein -
  FOC73_RS01905 (FOC73_01905) - 416632..417603 (-) 972 WP_037605070.1 sensor histidine kinase -
  FOC73_RS01910 (FOC73_01910) braR 417596..418276 (-) 681 WP_002885340.1 response regulator transcription factor Regulator
  FOC73_RS01915 (FOC73_01915) - 418725..419306 (+) 582 WP_002885204.1 xanthine phosphoribosyltransferase -
  FOC73_RS01920 (FOC73_01920) - 419306..420574 (+) 1269 WP_002885284.1 nucleobase:cation symporter-2 family protein -
  FOC73_RS01925 (FOC73_01925) - 420697..422298 (-) 1602 WP_002885370.1 ABC transporter ATP-binding protein -
  FOC73_RS01930 (FOC73_01930) - 422390..423223 (+) 834 WP_002885299.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26065.43 Da        Isoelectric Point: 4.9992

>NTDB_id=396863 FOC73_RS01910 WP_002885340.1 417596..418276(-) (braR) [Streptococcus salivarius strain FDAARGOS_771]
MHKILLVEDDEVIRQQVKKILEQWGYEVVLVEDFMEVLSIFVKVEPHLVLMDIGLPLFNGYHWCQEIRKVSKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSYEFGKDQSLLEYMGVILNLKAMDLVYQGEVVPLTKNEFQIL
QVLFDHAGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLKDFIETKKGVGYGLRHDG

Nucleotide


Download         Length: 681 bp        

>NTDB_id=396863 FOC73_RS01910 WP_002885340.1 417596..418276(-) (braR) [Streptococcus salivarius strain FDAARGOS_771]
ATGCATAAGATTTTATTAGTGGAGGACGACGAGGTTATCCGTCAACAAGTCAAAAAAATACTAGAACAGTGGGGTTACGA
AGTTGTTCTTGTTGAAGATTTCATGGAAGTATTATCTATTTTTGTAAAAGTAGAGCCCCACTTGGTTCTTATGGACATTG
GTTTACCTCTATTTAATGGTTATCATTGGTGTCAGGAAATTCGTAAGGTCTCCAAGGTGCCTATTATGTTCTTGTCTTCC
AGAGATCAGGCCATGGATATCGTTATGGCAATCAATATGGGTGGGGACGACTTTGTGACTAAACCCTTTGACCAAAATGT
TCTCTTGGCAAAAATTCAAGGGCTTTTGCGCCGATCTTATGAGTTTGGAAAGGATCAGAGTCTTTTGGAATATATGGGTG
TGATTTTGAACCTTAAGGCCATGGATCTGGTTTATCAGGGAGAAGTCGTTCCTTTGACCAAGAACGAGTTTCAGATTTTA
CAAGTTCTCTTCGACCATGCTGGAAATATCGTTAGTCGGGAAGACCTCATGAAGGAGCTTTGGAACAGTGACTTCTTTAT
TGATGATAATACCCTGTCTGTCAATGTGGCACGTTTACGTAAGAAGTTAGAGGCAGTTGGTTTGAAGGACTTTATTGAAA
CCAAGAAAGGTGTCGGTTACGGGTTGCGTCATGATGGATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

52.294

96.46

0.504
  micA Streptococcus pneumoniae Cp1015

35.043

100

0.363