Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | VVMO6_RS01725 | Genome accession | NC_014965 |
| Coordinates | 350082..350672 (+) | Length | 196 a.a. |
| NCBI ID | WP_011079353.1 | Uniprot ID | - |
| Organism | Vibrio vulnificus MO6-24/O | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 345082..355672
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VVMO6_RS01710 (VVM_00611) | oxyR | 345462..346361 (+) | 900 | WP_011079350.1 | DNA-binding transcriptional regulator OxyR | - |
| VVMO6_RS01715 (VVM_00616) | - | 346432..348945 (-) | 2514 | WP_013571033.1 | penicillin-binding protein 1A | - |
| VVMO6_RS01720 (VVM_00617) | pilM | 349085..350092 (+) | 1008 | WP_011151279.1 | type IV pilus assembly protein PilM | Machinery gene |
| VVMO6_RS01725 (VVM_00618) | pilN | 350082..350672 (+) | 591 | WP_011079353.1 | PilN domain-containing protein | Machinery gene |
| VVMO6_RS01730 (VVM_00620) | pilO | 350665..351255 (+) | 591 | WP_011079354.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| VVMO6_RS01735 (VVM_00622) | pilP | 351245..351757 (+) | 513 | WP_011079355.1 | pilus assembly protein PilP | Machinery gene |
| VVMO6_RS01740 (VVM_00624) | pilQ | 351771..353555 (+) | 1785 | WP_013571034.1 | type IV pilus secretin PilQ | Machinery gene |
| VVMO6_RS01745 (VVM_00626) | aroK | 353757..354275 (+) | 519 | WP_011079357.1 | shikimate kinase AroK | - |
| VVMO6_RS01750 (VVM_00628) | aroB | 354308..355399 (+) | 1092 | WP_011079358.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22672.91 Da Isoelectric Point: 7.6441
>NTDB_id=39659 VVMO6_RS01725 WP_011079353.1 350082..350672(+) (pilN) [Vibrio vulnificus MO6-24/O]
MQHKINLLPWREHKREEHKRRFVSLVALGALIAVGIQWGIGQYFSYQQRLQQERLDYLTHYIAQLDQRIQAMNIAKEEHS
QILARLKVVESLQAERNKTTAFMNLMTELIPEGVYVDKIKMNTNDVELAGISDSTARLATMLDNLERSTFLKEVEMHSIV
HDKKRFGKSFQTFTVSFVFDEHADSANTLAKEGNHG
MQHKINLLPWREHKREEHKRRFVSLVALGALIAVGIQWGIGQYFSYQQRLQQERLDYLTHYIAQLDQRIQAMNIAKEEHS
QILARLKVVESLQAERNKTTAFMNLMTELIPEGVYVDKIKMNTNDVELAGISDSTARLATMLDNLERSTFLKEVEMHSIV
HDKKRFGKSFQTFTVSFVFDEHADSANTLAKEGNHG
Nucleotide
Download Length: 591 bp
>NTDB_id=39659 VVMO6_RS01725 WP_011079353.1 350082..350672(+) (pilN) [Vibrio vulnificus MO6-24/O]
ATGCAGCATAAGATCAACCTGTTACCTTGGCGTGAACACAAGCGTGAGGAGCATAAACGTCGTTTTGTCAGTCTGGTCGC
ATTAGGTGCCCTGATCGCGGTCGGTATTCAGTGGGGCATTGGCCAGTACTTTTCATACCAACAACGTTTGCAGCAAGAGC
GTCTCGATTATCTTACCCACTATATCGCACAGTTGGATCAGCGTATCCAAGCGATGAACATTGCCAAGGAAGAGCATAGC
CAGATCCTCGCTCGACTCAAGGTTGTCGAGTCGCTTCAAGCGGAACGCAACAAAACCACCGCATTTATGAACTTGATGAC
GGAACTGATCCCTGAGGGGGTGTATGTCGACAAGATCAAAATGAACACCAACGACGTTGAGTTGGCTGGCATAAGCGATA
GTACCGCTCGACTCGCCACCATGTTGGATAATTTGGAACGTTCCACCTTTCTAAAAGAAGTGGAGATGCATTCGATTGTT
CATGACAAGAAGCGTTTTGGTAAGAGCTTCCAGACGTTTACCGTTTCTTTTGTGTTTGATGAACATGCCGATTCTGCCAA
TACGTTGGCCAAGGAGGGGAATCATGGCTAG
ATGCAGCATAAGATCAACCTGTTACCTTGGCGTGAACACAAGCGTGAGGAGCATAAACGTCGTTTTGTCAGTCTGGTCGC
ATTAGGTGCCCTGATCGCGGTCGGTATTCAGTGGGGCATTGGCCAGTACTTTTCATACCAACAACGTTTGCAGCAAGAGC
GTCTCGATTATCTTACCCACTATATCGCACAGTTGGATCAGCGTATCCAAGCGATGAACATTGCCAAGGAAGAGCATAGC
CAGATCCTCGCTCGACTCAAGGTTGTCGAGTCGCTTCAAGCGGAACGCAACAAAACCACCGCATTTATGAACTTGATGAC
GGAACTGATCCCTGAGGGGGTGTATGTCGACAAGATCAAAATGAACACCAACGACGTTGAGTTGGCTGGCATAAGCGATA
GTACCGCTCGACTCGCCACCATGTTGGATAATTTGGAACGTTCCACCTTTCTAAAAGAAGTGGAGATGCATTCGATTGTT
CATGACAAGAAGCGTTTTGGTAAGAGCTTCCAGACGTTTACCGTTTCTTTTGTGTTTGATGAACATGCCGATTCTGCCAA
TACGTTGGCCAAGGAGGGGAATCATGGCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio campbellii strain DS40M4 |
67.956 |
92.347 |
0.628 |
| pilN | Vibrio cholerae strain A1552 |
63.277 |
90.306 |
0.571 |