Detailed information
Bioinformatically predicted
Overview
| Name | hapR | Type | Regulator |
| Locus tag | GFB47_RS01535 | Genome accession | NZ_CP045699 |
| Coordinates | 347296..347910 (-) | Length | 204 a.a. |
| NCBI ID | WP_153446021.1 | Uniprot ID | A0A5Q0TDP0 |
| Organism | Vibrio algicola strain SM1977 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
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Genomic Context
Location: 342296..352910
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFB47_RS01525 (GFB47_01530) | aceF | 343559..345463 (+) | 1905 | WP_153446016.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| GFB47_RS01530 (GFB47_01535) | lpdA | 345748..347175 (+) | 1428 | WP_153446019.1 | dihydrolipoyl dehydrogenase | - |
| GFB47_RS01535 (GFB47_01540) | hapR | 347296..347910 (-) | 615 | WP_153446021.1 | TetR/AcrR family transcriptional regulator | Regulator |
| GFB47_RS01540 (GFB47_01545) | hpt | 348203..348733 (+) | 531 | WP_153446022.1 | hypoxanthine phosphoribosyltransferase | - |
| GFB47_RS01545 (GFB47_01550) | can | 349043..349714 (-) | 672 | WP_153446024.1 | carbonate dehydratase | - |
| GFB47_RS01550 (GFB47_01555) | - | 349811..350770 (+) | 960 | WP_153446026.1 | ABC transporter ATP-binding protein | - |
| GFB47_RS01555 (GFB47_01560) | - | 350770..351540 (+) | 771 | WP_153446027.1 | ABC transporter permease | - |
| GFB47_RS01560 (GFB47_01565) | - | 351745..352284 (-) | 540 | WP_153446029.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23675.10 Da Isoelectric Point: 5.6632
>NTDB_id=396068 GFB47_RS01535 WP_153446021.1 347296..347910(-) (hapR) [Vibrio algicola strain SM1977]
MDILTRRPRTRLSPEKRKLQLLEIAIEVFAKRGIGRGGHADIADIAQVSVATVFNYFPTREDLVDEVLTNVEQHFSAFLL
ENINLDLPVKQNLSTLSNQLVDLVLDDIQWTKIWFEWSTSTREEVWPLFVSTHSQHQKYFREMFVKGIENGEICDEQNPS
NIAKLFHGICYSIFVQANRRPDKESLTKLVASFLDMLCIYKEKD
MDILTRRPRTRLSPEKRKLQLLEIAIEVFAKRGIGRGGHADIADIAQVSVATVFNYFPTREDLVDEVLTNVEQHFSAFLL
ENINLDLPVKQNLSTLSNQLVDLVLDDIQWTKIWFEWSTSTREEVWPLFVSTHSQHQKYFREMFVKGIENGEICDEQNPS
NIAKLFHGICYSIFVQANRRPDKESLTKLVASFLDMLCIYKEKD
Nucleotide
Download Length: 615 bp
>NTDB_id=396068 GFB47_RS01535 WP_153446021.1 347296..347910(-) (hapR) [Vibrio algicola strain SM1977]
ATGGATATATTAACTCGACGCCCAAGGACTCGGCTGTCCCCTGAAAAGCGAAAATTACAGCTTTTAGAAATCGCCATCGA
AGTATTTGCTAAGCGCGGCATTGGCCGTGGTGGCCACGCAGATATCGCGGATATCGCTCAAGTCTCGGTTGCCACTGTGT
TTAATTACTTTCCAACCCGTGAGGATTTAGTTGATGAAGTGCTCACCAATGTAGAACAACATTTCTCCGCCTTTTTATTG
GAAAATATAAATTTAGATCTGCCGGTTAAACAAAATTTATCTACCCTTTCTAACCAGCTAGTCGATTTAGTTTTAGACGA
TATTCAGTGGACTAAGATTTGGTTTGAATGGAGCACCTCAACTCGCGAAGAAGTATGGCCATTATTTGTTTCAACTCACA
GTCAGCATCAAAAGTATTTCCGTGAGATGTTTGTGAAAGGCATTGAAAATGGTGAGATTTGTGACGAACAAAACCCAAGT
AATATAGCTAAGTTATTCCATGGTATTTGTTATTCAATATTCGTGCAGGCTAATCGTCGTCCAGATAAAGAAAGCCTCAC
TAAGTTAGTTGCCAGCTTTTTAGATATGTTGTGTATTTATAAAGAAAAGGATTAA
ATGGATATATTAACTCGACGCCCAAGGACTCGGCTGTCCCCTGAAAAGCGAAAATTACAGCTTTTAGAAATCGCCATCGA
AGTATTTGCTAAGCGCGGCATTGGCCGTGGTGGCCACGCAGATATCGCGGATATCGCTCAAGTCTCGGTTGCCACTGTGT
TTAATTACTTTCCAACCCGTGAGGATTTAGTTGATGAAGTGCTCACCAATGTAGAACAACATTTCTCCGCCTTTTTATTG
GAAAATATAAATTTAGATCTGCCGGTTAAACAAAATTTATCTACCCTTTCTAACCAGCTAGTCGATTTAGTTTTAGACGA
TATTCAGTGGACTAAGATTTGGTTTGAATGGAGCACCTCAACTCGCGAAGAAGTATGGCCATTATTTGTTTCAACTCACA
GTCAGCATCAAAAGTATTTCCGTGAGATGTTTGTGAAAGGCATTGAAAATGGTGAGATTTGTGACGAACAAAACCCAAGT
AATATAGCTAAGTTATTCCATGGTATTTGTTATTCAATATTCGTGCAGGCTAATCGTCGTCCAGATAAAGAAAGCCTCAC
TAAGTTAGTTGCCAGCTTTTTAGATATGTTGTGTATTTATAAAGAAAAGGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hapR | Vibrio cholerae C6706 |
64.141 |
97.059 |
0.623 |
| hapR | Vibrio cholerae strain A1552 |
64.141 |
97.059 |
0.623 |
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
62.069 |
99.51 |
0.618 |