Detailed information NTG0395911

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: GFH30_RS07695
• Genome accession: NZ_CP045650
• Coordinates: 1630153..1630863 (-)
• Length: 236 a.a.
• NCBI ID: WP_153371673.1
• Uniprot ID: A0A5Q0P5B6
• Organism: Acinetobacter wanghuae strain dk386
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1625153..1635863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GFH30_RS07665 (GFH30_07660)	-	1625563..1625994 (-)	432	WP_153371667.1	SRPBCC family protein	-
GFH30_RS07670 (GFH30_07665)	tadA	1626026..1626574 (-)	549	WP_153371668.1	tRNA adenosine(34) deaminase TadA	-
GFH30_RS07675 (GFH30_07670)	-	1626578..1627702 (-)	1125	WP_153371669.1	enoyl-CoA hydratase/isomerase family protein	-
GFH30_RS07680 (GFH30_07675)	ung	1627699..1628412 (-)	714	WP_153371670.1	uracil-DNA glycosylase	-
GFH30_RS07685 (GFH30_07680)	-	1628462..1629058 (-)	597	WP_153371671.1	6-carboxytetrahydropterin synthase	-
GFH30_RS07690 (GFH30_07685)	gspK	1629188..1630135 (-)	948	WP_153371672.1	type II secretion system minor pseudopilin GspK	-
GFH30_RS07695 (GFH30_07690)	xcpW	1630153..1630863 (-)	711	WP_153371673.1	type II secretion system minor pseudopilin GspJ	Machinery gene
GFH30_RS07700 (GFH30_07695)	xcpV	1630860..1631375 (-)	516	WP_153371674.1	type II secretion system minor pseudopilin GspI	Machinery gene
GFH30_RS07705 (GFH30_07700)	-	1631365..1631916 (-)	552	WP_153371675.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
GFH30_RS07710 (GFH30_07705)	-	1631926..1632540 (-)	615	WP_153371676.1	TetR/AcrR family transcriptional regulator	-
GFH30_RS07715 (GFH30_07710)	-	1632586..1633359 (-)	774	WP_153371677.1	TatD family hydrolase	-
GFH30_RS07720 (GFH30_07715)	-	1633387..1633728 (-)	342	WP_153371678.1	PilZ domain-containing protein	-
GFH30_RS07725 (GFH30_07720)	-	1633747..1634730 (-)	984	WP_153371679.1	DNA polymerase III subunit delta'	-
GFH30_RS07730 (GFH30_07725)	kdsB	1634745..1635506 (-)	762	WP_153371680.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 236 a.a.
• Molecular weight: 27102.03 Da
• Isoelectric Point: 7.3564

>NTDB_id=395911 GFH30_RS07695 WP_153371673.1 1630153..1630863(-) (xcpW) [Acinetobacter wanghuae strain dk386]
MIAKLRACQISNKPQEKLSSRQKTRGFLHSALGFTLVELLVAIAIFAVLSALGWKVFDHIISTKDQNTMHEQRLSAVQQG
YQQILRDTVQIVPLTSNLNGEIRPALVLQNGRLSFSKTGVTDPLQQGISPDERVEYQYRQDEKKLYRLRYQNLNQTGREQ
PDSSVLLENVDQFQIMVLNPDELSEWPKNGVDLEQIIEKQKLPKGIKINLTIHDVEYEWLFSLLNTDFLNQTKVNV

Nucleotide

• Length: 711 bp

>NTDB_id=395911 GFH30_RS07695 WP_153371673.1 1630153..1630863(-) (xcpW) [Acinetobacter wanghuae strain dk386]
ATGATCGCTAAATTGCGTGCCTGTCAAATATCAAATAAACCACAAGAAAAATTATCTAGTCGGCAGAAAACACGTGGCTT
TCTTCATTCGGCTTTGGGTTTTACCTTGGTTGAACTGTTGGTCGCAATCGCAATTTTCGCGGTCTTGTCTGCTTTAGGTT
GGAAAGTATTTGATCATATTATTTCCACAAAAGATCAAAATACAATGCATGAGCAACGTTTGTCTGCTGTGCAGCAAGGC
TATCAGCAAATTTTAAGAGATACCGTGCAAATTGTACCACTGACCTCGAATCTGAATGGGGAGATTCGTCCAGCTTTAGT
TTTGCAAAATGGACGCTTGAGTTTTAGTAAAACAGGGGTGACTGACCCATTGCAGCAAGGCATTTCACCAGATGAACGGG
TTGAATATCAATATCGCCAAGATGAAAAAAAACTCTATCGATTACGCTATCAAAATTTGAATCAAACCGGACGTGAGCAA
CCTGATTCAAGTGTCTTGCTTGAAAATGTCGATCAATTTCAGATTATGGTGTTAAATCCCGATGAGCTGAGTGAGTGGCC
AAAAAATGGTGTTGATTTAGAGCAAATCATCGAGAAACAAAAATTGCCCAAGGGGATAAAAATTAATCTGACCATACATG
ATGTTGAATATGAGTGGTTATTTAGTTTGCTCAATACTGATTTTTTAAATCAAACGAAGGTGAATGTTTGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (32-52)

• Type II secretion system (T2SS), protein J (T2SSJ) (86-220)

3D structure

• AlphaFold DB: A0A5Q0P5B6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	57.075	89.831	0.513