Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SGGB_RS07945 Genome accession   NC_017576
Coordinates   1604092..1604901 (-) Length   269 a.a.
NCBI ID   WP_009854644.1    Uniprot ID   A0A1H7V9H2
Organism   Streptococcus gallolyticus subsp. gallolyticus ATCC 43143     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1599092..1609901
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGGB_RS07935 (SGGB_1546) smc 1599206..1602745 (-) 3540 WP_012962236.1 chromosome segregation protein SMC -
  SGGB_RS07940 (SGGB_1547) rnc 1602876..1603562 (-) 687 WP_009854642.1 ribonuclease III -
  SGGB_RS07945 (SGGB_1549) vicX 1604092..1604901 (-) 810 WP_009854644.1 MBL fold metallo-hydrolase Regulator
  SGGB_RS07950 (SGGB_1550) vicK 1604902..1606254 (-) 1353 WP_009854645.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SGGB_RS07955 (SGGB_1551) yycF 1606247..1606957 (-) 711 WP_009854646.1 response regulator YycF -
  SGGB_RS07960 (SGGB_1552) - 1607262..1608026 (+) 765 WP_009854647.1 amino acid ABC transporter ATP-binding protein -
  SGGB_RS07965 (SGGB_1553) - 1608037..1608849 (+) 813 WP_014620198.1 transporter substrate-binding domain-containing protein -
  SGGB_RS07970 (SGGB_1554) - 1608866..1609570 (+) 705 WP_009854649.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30298.24 Da        Isoelectric Point: 5.3852

>NTDB_id=39567 SGGB_RS07945 WP_009854644.1 1604092..1604901(-) (vicX) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
MSENAFKYSILASGSTGNSFYVETPQKRFLIDAGLTGKKITSLLAEIDRKPEDLDAIFITHEHSDHIKGVGVLARRYNLD
VYANEKTWQMIDERNMIGKLDLAQKHIFERGKTLTLGDIDIESFGVSHDAVEPQFYRLMKDNKSFVVLTDTGYVSDRMAG
IIENADGYLIESNHDVEILRSGSYPWSLKQRILSDKGHLSNEDGAGTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLIQADFGVGYDMKVFDTSPDEATPLTEL

Nucleotide


Download         Length: 810 bp        

>NTDB_id=39567 SGGB_RS07945 WP_009854644.1 1604092..1604901(-) (vicX) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
ATGTCTGAAAATGCTTTTAAATATAGTATTTTAGCCTCCGGTTCAACTGGAAATTCTTTTTATGTGGAAACACCACAAAA
ACGTTTTTTGATTGATGCGGGTTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCAGAAGACT
TAGATGCTATTTTTATTACACACGAACATTCTGACCATATCAAAGGAGTTGGGGTGTTAGCACGTCGTTATAATCTTGAT
GTTTATGCGAATGAAAAAACGTGGCAAATGATTGATGAGCGAAATATGATTGGAAAGCTTGATTTAGCTCAAAAACATAT
TTTTGAACGTGGGAAAACATTGACACTTGGTGACATTGATATTGAAAGTTTTGGTGTTAGCCACGATGCCGTTGAGCCAC
AATTTTATCGTTTGATGAAAGATAATAAATCATTTGTTGTCTTAACAGATACAGGTTATGTTAGTGACCGCATGGCAGGA
ATTATTGAAAATGCTGACGGTTACTTGATTGAATCGAATCATGACGTTGAGATTTTACGTTCAGGCTCTTATCCGTGGAG
TTTGAAACAACGTATCCTATCTGATAAAGGACACTTGTCAAACGAAGATGGTGCTGGGACAATGATTCGAACCATTGGAA
ATCGCACGAAGAAAATTTACCTTGGACATTTGAGTAAAGAAAACAATATCAAAGAATTGGCTCACATGACCATGGAAAAT
AATCTTATTCAAGCTGACTTTGGGGTTGGTTATGACATGAAAGTCTTTGATACCTCACCAGACGAAGCAACACCATTAAC
AGAGTTATAA

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1H7V9H2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment