Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   GFB63_RS04285 Genome accession   NZ_CP045596
Coordinates   836421..837188 (+) Length   255 a.a.
NCBI ID   WP_011681768.1    Uniprot ID   A0A0E2PYL2
Organism   Streptococcus thermophilus strain TK-P3A     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 831421..842188
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GFB63_RS04270 (GFB63_04390) - 833737..834420 (-) 684 WP_084829194.1 YoaK family protein -
  GFB63_RS04275 (GFB63_04395) rlmH 834436..834915 (-) 480 WP_084829195.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GFB63_RS04280 (GFB63_04400) htrA 835120..836355 (+) 1236 WP_084829196.1 S1C family serine protease Regulator
  GFB63_RS04285 (GFB63_04405) spo0J 836421..837188 (+) 768 WP_011681768.1 ParB/RepB/Spo0J family partition protein Regulator
  GFB63_RS04290 (GFB63_04410) dnaA 837427..838791 (+) 1365 WP_084828394.1 chromosomal replication initiator protein DnaA -
  GFB63_RS04295 (GFB63_04415) dnaN 838937..840073 (+) 1137 WP_084828395.1 DNA polymerase III subunit beta -
  GFB63_RS04300 (GFB63_04420) - 840124..840315 (+) 192 WP_084828396.1 DUF951 domain-containing protein -
  GFB63_RS04305 (GFB63_04425) ychF 840528..841643 (+) 1116 WP_002948588.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29447.80 Da        Isoelectric Point: 9.4740

>NTDB_id=395466 GFB63_RS04285 WP_011681768.1 836421..837188(+) (spo0J) [Streptococcus thermophilus strain TK-P3A]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNVLRLLQLPREIQTSIENGSLSQG
HARALLAIEDSQKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=395466 GFB63_RS04285 WP_011681768.1 836421..837188(+) (spo0J) [Streptococcus thermophilus strain TK-P3A]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGTTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCAAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2PYL2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569

Multiple sequence alignment