Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | SGGB_RS03430 | Genome accession | NC_017576 |
| Coordinates | 647250..647846 (+) | Length | 198 a.a. |
| NCBI ID | WP_013642852.1 | Uniprot ID | A0A1H9PP45 |
| Organism | Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 642250..652846
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SGGB_RS03410 (SGGB_0622) | - | 642789..643355 (-) | 567 | WP_013642847.1 | DUF3267 domain-containing protein | - |
| SGGB_RS03415 (SGGB_0623) | - | 643604..644125 (+) | 522 | WP_013642848.1 | transcription repressor NadR | - |
| SGGB_RS03420 (SGGB_0624) | - | 644322..644876 (+) | 555 | WP_013642849.1 | hypothetical protein | - |
| SGGB_RS03425 (SGGB_0625) | pbp2b | 645031..647184 (+) | 2154 | WP_013642850.1 | penicillin-binding protein PBP2B | - |
| SGGB_RS03430 (SGGB_0626) | recR | 647250..647846 (+) | 597 | WP_013642852.1 | recombination mediator RecR | Machinery gene |
| SGGB_RS03435 (SGGB_0627) | - | 648084..649130 (+) | 1047 | WP_014619985.1 | D-alanine--D-alanine ligase | - |
| SGGB_RS03440 (SGGB_0628) | - | 649235..649795 (-) | 561 | WP_012961655.1 | folate family ECF transporter S component | - |
| SGGB_RS03445 (SGGB_0629) | - | 650039..651403 (+) | 1365 | WP_014619986.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| SGGB_RS03450 (SGGB_0630) | - | 651434..652570 (+) | 1137 | WP_013642854.1 | polymerase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21707.84 Da Isoelectric Point: 4.5278
>NTDB_id=39537 SGGB_RS03430 WP_013642852.1 647250..647846(+) (recR) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
MLYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDEDPCNICTDETRDHS
VILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDDINLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
MLYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDEDPCNICTDETRDHS
VILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDDINLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=39537 SGGB_RS03430 WP_013642852.1 647250..647846(+) (recR) [Streptococcus gallolyticus subsp. gallolyticus ATCC 43143]
ATGCTTTATCCAACACCTATCGCAAAGCTGATTGATAGTTTTACAAAATTACCAGGAATTGGTATAAAAACAGCAACACG
TTTGGCTTTCTACACGATTGGAATGTCAGATGAAGATGTGAATGAATTCGCCAAAAATTTATTGGCAGCTAAGCGTGAAT
TGACTTATTGTTCCGTTTGTGGGAATTTAACAGATGAAGACCCTTGTAATATCTGTACAGATGAAACTCGTGATCATTCC
GTTATTTTAGTGGTTGAAGATTCAAAAGACGTATCTGCCATGGAAAAAATTCAAGAGTATCATGGCTTGTACCATGTCTT
GCATGGCTTGATTTCACCAATGAACGGTGTCGGACCAGATGATATTAATTTGAAATCATTGATTACACGTTTAATGGATA
GTGAGGTCAATGAAGTGATTATTGCAACCAATGCAACCGCAGACGGTGAAGCAACATCTATGTATATCTCACGTGTCCTA
AAACCAGCAGGAATCAAGGTAACACGTTTAGCACGTGGACTGGCTGTTGGCTCAGACATCGAATACGCTGACGAAGTCAC
CCTACTTCGTGCTATCGAAAATCGGACAGAATTGTAG
ATGCTTTATCCAACACCTATCGCAAAGCTGATTGATAGTTTTACAAAATTACCAGGAATTGGTATAAAAACAGCAACACG
TTTGGCTTTCTACACGATTGGAATGTCAGATGAAGATGTGAATGAATTCGCCAAAAATTTATTGGCAGCTAAGCGTGAAT
TGACTTATTGTTCCGTTTGTGGGAATTTAACAGATGAAGACCCTTGTAATATCTGTACAGATGAAACTCGTGATCATTCC
GTTATTTTAGTGGTTGAAGATTCAAAAGACGTATCTGCCATGGAAAAAATTCAAGAGTATCATGGCTTGTACCATGTCTT
GCATGGCTTGATTTCACCAATGAACGGTGTCGGACCAGATGATATTAATTTGAAATCATTGATTACACGTTTAATGGATA
GTGAGGTCAATGAAGTGATTATTGCAACCAATGCAACCGCAGACGGTGAAGCAACATCTATGTATATCTCACGTGTCCTA
AAACCAGCAGGAATCAAGGTAACACGTTTAGCACGTGGACTGGCTGTTGGCTCAGACATCGAATACGCTGACGAAGTCAC
CCTACTTCGTGCTATCGAAAATCGGACAGAATTGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
87.374 |
100 |
0.874 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
65.152 |
100 |
0.652 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.205 |
98.485 |
0.475 |