Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | DLI71_RS12435 | Genome accession | NZ_CP045528 |
| Coordinates | 2565815..2566375 (-) | Length | 186 a.a. |
| NCBI ID | WP_085916952.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 6507 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2560815..2571375
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLI71_RS12425 (DLI71_12425) | pilX | 2563998..2564816 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| DLI71_RS12430 (DLI71_12430) | pilW | 2564813..2565814 (-) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| DLI71_RS12435 (DLI71_12435) | pilV | 2565815..2566375 (-) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| DLI71_RS12440 (DLI71_12440) | fimU | 2566369..2566842 (-) | 474 | WP_100783490.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| DLI71_RS12445 (DLI71_12445) | ispH | 2567012..2567962 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| DLI71_RS12450 (DLI71_12450) | gmk | 2568085..2568714 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| DLI71_RS12455 (DLI71_12455) | rpoZ | 2568787..2569065 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| DLI71_RS12460 (DLI71_12460) | - | 2569104..2569233 (+) | 130 | Protein_2468 | hypothetical protein | - |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 20190.13 Da Isoelectric Point: 8.2254
>NTDB_id=394884 DLI71_RS12435 WP_085916952.1 2565815..2566375(-) (pilV) [Acinetobacter baumannii strain 6507]
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGRTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGRTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=394884 DLI71_RS12435 WP_085916952.1 2565815..2566375(-) (pilV) [Acinetobacter baumannii strain 6507]
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGCTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCATCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTCGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAGAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGCTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCATCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTCGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAGAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
99.462 |
100 |
0.995 |
| pilV | Acinetobacter baylyi ADP1 |
40.86 |
100 |
0.409 |