Detailed information
Bioinformatically predicted
Overview
| Name | pilL-C | Type | Machinery gene |
| Locus tag | HPY14_RS07235 | Genome accession | NZ_CP053798 |
| Coordinates | 1594968..1595348 (+) | Length | 126 a.a. |
| NCBI ID | WP_000045526.1 | Uniprot ID | Q6BBL2 |
| Organism | Vibrio cholerae strain SL5Y | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1589968..1600348
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPY14_RS07210 (HPY14_07210) | - | 1590560..1591216 (+) | 657 | WP_000974697.1 | HEAT repeat domain-containing protein | - |
| HPY14_RS07215 (HPY14_07215) | - | 1591227..1592072 (+) | 846 | WP_001002907.1 | protein-glutamate O-methyltransferase CheR | - |
| HPY14_RS07220 (HPY14_07220) | - | 1592072..1592443 (+) | 372 | WP_000757478.1 | PleD family two-component system response regulator | - |
| HPY14_RS07225 (HPY14_07225) | - | 1592452..1594725 (+) | 2274 | WP_162298855.1 | chemotaxis protein CheA | - |
| HPY14_RS07230 (HPY14_07230) | - | 1594715..1594975 (+) | 261 | WP_001143862.1 | hypothetical protein | - |
| HPY14_RS07235 (HPY14_07235) | pilL-C | 1594968..1595348 (+) | 381 | WP_000045526.1 | response regulator | Machinery gene |
| HPY14_RS07240 (HPY14_07240) | - | 1595356..1596591 (+) | 1236 | WP_094392123.1 | methyl-accepting chemotaxis protein | - |
| HPY14_RS07245 (HPY14_07245) | - | 1596646..1596960 (-) | 315 | WP_094392124.1 | multidrug efflux SMR transporter | - |
| HPY14_RS07250 (HPY14_07250) | - | 1597116..1598630 (-) | 1515 | WP_094392125.1 | cryptochrome/deoxyribodipyrimidine photo-lyase family protein | - |
| HPY14_RS07255 (HPY14_07255) | - | 1598786..1600192 (-) | 1407 | WP_175233881.1 | MDR family MFS transporter | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13674.04 Da Isoelectric Point: 9.8959
>NTDB_id=394882 HPY14_RS07235 WP_000045526.1 1594968..1595348(+) (pilL-C) [Vibrio cholerae strain SL5Y]
MSKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRMDGIELISKIRAIASYRFTPI
LVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQVLPGSIS
MSKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRMDGIELISKIRAIASYRFTPI
LVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQVLPGSIS
Nucleotide
Download Length: 381 bp
>NTDB_id=394882 HPY14_RS07235 WP_000045526.1 1594968..1595348(+) (pilL-C) [Vibrio cholerae strain SL5Y]
ATGTCTAAAAGCATTCTGATTGTTGATGACTCTAGTACTGTTCTTATGAGTGTCGATGCTATGCTCTCTAAACTGGGTTT
CCAAGTCGAGAAAGCAAAAGATGGCGTTGAAGCAGAAACTCGACTCAAAGGTGGTCTAAAAGTCAACCTCATCATTACCG
ACATCAATATGCCTCGTATGGATGGTATTGAGTTGATTAGCAAAATTCGTGCGATTGCTTCATATCGCTTTACCCCAATT
TTAGTGCTCACTACAGAACAAGAACAAGCCAAACGCAATGAGGCTCGCGCCAAAGGTGCAACAGGTTATTTAGTTAAGCC
CGTAACGGGAGATCAATTGAAAGCCGTGATTCAACAAGTTCTCCCCGGTAGTATTTCGTGA
ATGTCTAAAAGCATTCTGATTGTTGATGACTCTAGTACTGTTCTTATGAGTGTCGATGCTATGCTCTCTAAACTGGGTTT
CCAAGTCGAGAAAGCAAAAGATGGCGTTGAAGCAGAAACTCGACTCAAAGGTGGTCTAAAAGTCAACCTCATCATTACCG
ACATCAATATGCCTCGTATGGATGGTATTGAGTTGATTAGCAAAATTCGTGCGATTGCTTCATATCGCTTTACCCCAATT
TTAGTGCTCACTACAGAACAAGAACAAGCCAAACGCAATGAGGCTCGCGCCAAAGGTGCAACAGGTTATTTAGTTAAGCC
CGTAACGGGAGATCAATTGAAAGCCGTGATTCAACAAGTTCTCCCCGGTAGTATTTCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilL-C | Synechocystis sp. PCC 6803 |
39.2 |
99.206 |
0.389 |