Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | DLI71_RS01085 | Genome accession | NZ_CP045528 |
| Coordinates | 222388..222768 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 6507 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 217388..227768
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLI71_RS01055 (DLI71_01055) | kdsB | 218291..219052 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| DLI71_RS01060 (DLI71_01060) | - | 219064..220044 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| DLI71_RS01065 (DLI71_01065) | - | 220056..220397 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| DLI71_RS01070 (DLI71_01070) | - | 220415..221188 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| DLI71_RS01075 (DLI71_01075) | - | 221226..221834 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| DLI71_RS01080 (DLI71_01080) | - | 221844..222398 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| DLI71_RS01085 (DLI71_01085) | xcpV | 222388..222768 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| DLI71_RS01090 (DLI71_01090) | xcpW | 222768..223469 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| DLI71_RS01095 (DLI71_01095) | gspK | 223469..224428 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| DLI71_RS01100 (DLI71_01100) | - | 224659..225255 (+) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| DLI71_RS01105 (DLI71_01105) | ung | 225306..226019 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| DLI71_RS01110 (DLI71_01110) | - | 226016..227140 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| DLI71_RS01115 (DLI71_01115) | tadA | 227147..227650 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=394858 DLI71_RS01085 WP_000836911.1 222388..222768(+) (xcpV) [Acinetobacter baumannii strain 6507]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=394858 DLI71_RS01085 WP_000836911.1 222388..222768(+) (xcpV) [Acinetobacter baumannii strain 6507]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |