Detailed information NTG0394859

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: DLI71_RS01090
• Genome accession: NZ_CP045528
• Coordinates: 222768..223469 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 6507
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 217768..228469

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DLI71_RS01055 (DLI71_01055)	kdsB	218291..219052 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
DLI71_RS01060 (DLI71_01060)	-	219064..220044 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
DLI71_RS01065 (DLI71_01065)	-	220056..220397 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
DLI71_RS01070 (DLI71_01070)	-	220415..221188 (+)	774	WP_000497298.1	TatD family hydrolase	-
DLI71_RS01075 (DLI71_01075)	-	221226..221834 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
DLI71_RS01080 (DLI71_01080)	-	221844..222398 (+)	555	WP_000841373.1	type II secretion system protein	-
DLI71_RS01085 (DLI71_01085)	xcpV	222388..222768 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
DLI71_RS01090 (DLI71_01090)	xcpW	222768..223469 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
DLI71_RS01095 (DLI71_01095)	gspK	223469..224428 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
DLI71_RS01100 (DLI71_01100)	-	224659..225255 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
DLI71_RS01105 (DLI71_01105)	ung	225306..226019 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
DLI71_RS01110 (DLI71_01110)	-	226016..227140 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
DLI71_RS01115 (DLI71_01115)	tadA	227147..227650 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
DLI71_RS01120 (DLI71_01120)	-	227720..228163 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=394859 DLI71_RS01090 WP_000594589.1 222768..223469(+) (xcpW) [Acinetobacter baumannii strain 6507]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=394859 DLI71_RS01090 WP_000594589.1 222768..223469(+) (xcpW) [Acinetobacter baumannii strain 6507]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996