Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   GE021_RS09775 Genome accession   NZ_CP053792
Coordinates   2002042..2002491 (-) Length   149 a.a.
NCBI ID   WP_003045511.1    Uniprot ID   A0A2D4DR43
Organism   Streptococcus canis strain HL_77_1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1997042..2007491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE021_RS09760 (GE021_009750) - 1997671..1998438 (-) 768 WP_125074691.1 epoxyqueuosine reductase QueH -
  GE021_RS09765 (GE021_009755) - 1998556..2000340 (-) 1785 WP_125074692.1 ABC transporter ATP-binding protein -
  GE021_RS09770 (GE021_009760) rcrP 2000340..2002049 (-) 1710 WP_125074693.1 ABC transporter ATP-binding protein Regulator
  GE021_RS09775 (GE021_009765) rcrR 2002042..2002491 (-) 450 WP_003045511.1 MarR family transcriptional regulator Regulator
  GE021_RS09780 (GE021_009770) - 2002791..2003807 (+) 1017 WP_125074694.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  GE021_RS09785 (GE021_009775) galU 2003839..2004744 (+) 906 WP_125074695.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  GE021_RS09790 (GE021_009780) - 2005008..2005679 (-) 672 WP_125074696.1 rhomboid family intramembrane serine protease -
  GE021_RS09795 (GE021_009785) - 2005676..2006203 (-) 528 WP_125074697.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17385.19 Da        Isoelectric Point: 9.6257

>NTDB_id=394660 GE021_RS09775 WP_003045511.1 2002042..2002491(-) (rcrR) [Streptococcus canis strain HL_77_1]
MSRVIADLRELTHQIEQISDEIARKYNLEHLAGPQGHVLVFLSKHQDQEIFVKDIEKELQISKSVTSNLVKRMVKNGFIQ
VLPSQADKRYKQIVLAQAGKDKLPLLQECRKDIEHYFFKEITREELLTVKKVIQQLKQNMLTYKGENNA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=394660 GE021_RS09775 WP_003045511.1 2002042..2002491(-) (rcrR) [Streptococcus canis strain HL_77_1]
ATGTCACGAGTAATTGCAGATTTGCGCGAATTAACGCATCAAATTGAGCAAATTAGTGATGAAATTGCTAGGAAATACAA
TTTGGAACATTTAGCAGGTCCTCAGGGACATGTGTTGGTTTTTCTATCCAAACATCAAGATCAGGAAATTTTTGTCAAGG
ATATTGAAAAAGAACTGCAGATTTCAAAATCGGTCACGAGCAATTTAGTCAAGCGCATGGTCAAAAACGGCTTTATCCAA
GTACTTCCCTCGCAGGCTGACAAGCGCTATAAACAAATTGTTTTGGCTCAGGCGGGTAAGGATAAATTACCCTTGCTTCA
AGAATGTCGTAAGGATATTGAACATTATTTTTTTAAGGAAATTACGAGAGAAGAGTTGCTGACGGTCAAAAAGGTGATTC
AGCAGCTCAAGCAAAATATGCTAACTTACAAAGGAGAGAACAATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D4DR43

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

45.714

93.96

0.43