Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   GE021_RS09770 Genome accession   NZ_CP053792
Coordinates   2000340..2002049 (-) Length   569 a.a.
NCBI ID   WP_125074693.1    Uniprot ID   A0A3P5XS20
Organism   Streptococcus canis strain HL_77_1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1995340..2007049
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE021_RS09750 (GE021_009740) - 1996002..1996448 (-) 447 WP_003045504.1 dUTP diphosphatase -
  GE021_RS09755 (GE021_009745) - 1996661..1997515 (-) 855 WP_125074690.1 Abi family protein -
  GE021_RS09760 (GE021_009750) - 1997671..1998438 (-) 768 WP_125074691.1 epoxyqueuosine reductase QueH -
  GE021_RS09765 (GE021_009755) - 1998556..2000340 (-) 1785 WP_125074692.1 ABC transporter ATP-binding protein -
  GE021_RS09770 (GE021_009760) rcrP 2000340..2002049 (-) 1710 WP_125074693.1 ABC transporter ATP-binding protein Regulator
  GE021_RS09775 (GE021_009765) rcrR 2002042..2002491 (-) 450 WP_003045511.1 MarR family transcriptional regulator Regulator
  GE021_RS09780 (GE021_009770) - 2002791..2003807 (+) 1017 WP_125074694.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  GE021_RS09785 (GE021_009775) galU 2003839..2004744 (+) 906 WP_125074695.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  GE021_RS09790 (GE021_009780) - 2005008..2005679 (-) 672 WP_125074696.1 rhomboid family intramembrane serine protease -
  GE021_RS09795 (GE021_009785) - 2005676..2006203 (-) 528 WP_125074697.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 63160.85 Da        Isoelectric Point: 5.9468

>NTDB_id=394659 GE021_RS09770 WP_125074693.1 2000340..2002049(-) (rcrP) [Streptococcus canis strain HL_77_1]
MLKEAILRYKWYVLGSLLMIIGVVASSLLQPHYLKDVLSAVIQNNQDKIYDVGRLLLIIALVGLVSGTLNTVLSAKIAQG
VSADIREKTFRKIQSFSYANVEAFNAGNLVVRMTNDITQIQNLVMMLFQVLLRLPILFMGSFIMAVQTLPDLWWVIVLMV
ILIGIIMALVMSQMGPRFGKFQKLMDKINRIAKENLRGVRVVKSFVQEREQYVKFKEASKELLDLNLFIGYGFSLMQPTL
MLVSYLAVYVSIYMVSGMVETDPAVIGNIASFMTYMMQIMFSIIMVGFMGMQASRAFVSIGRIKEVLNTEPAMTFETDQE
EEVSGSIVFEDVSFTYPNDDEPTLRHISFSIEPGQMIGVVGATGAGKSTLAQLIPRLFDPQEGQILLGGKPITSLSQATL
RQTVSIVLQKAILFSGTIADNLRQGSATADDYAMERAARIAQAMEFIDRMDGRYESQVEERGNNFSGGQKQRMSIARGVI
NQPKILVLDDSTSALDAKSEKLVQEALNKELKGTTTVIIAQKISSVVKADKILVLDQGQLLGEGTHAELLANNAVYREIY
DTQKGKEED

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=394659 GE021_RS09770 WP_125074693.1 2000340..2002049(-) (rcrP) [Streptococcus canis strain HL_77_1]
ATGCTTAAAGAGGCAATCCTGCGTTACAAATGGTACGTTTTAGGCTCGCTACTGATGATTATTGGGGTGGTTGCGAGTAG
TCTGTTACAACCTCATTATTTAAAGGATGTGTTAAGTGCCGTTATTCAAAATAACCAAGATAAGATTTATGATGTGGGGA
GGTTGTTGCTTATCATTGCCCTTGTGGGCTTGGTTTCTGGAACCCTTAATACGGTTTTATCGGCTAAGATTGCTCAAGGG
GTTTCAGCTGATATTCGTGAGAAGACTTTCCGAAAAATTCAGAGTTTTTCTTATGCCAATGTCGAGGCATTTAATGCTGG
GAACCTTGTCGTTCGGATGACCAATGATATTACTCAAATTCAAAATTTGGTGATGATGCTGTTTCAGGTTCTCCTTCGAT
TGCCAATTCTCTTTATGGGCTCTTTTATTATGGCAGTGCAGACCTTACCTGACTTGTGGTGGGTCATTGTGCTGATGGTC
ATTTTAATTGGGATAATCATGGCTTTGGTCATGAGTCAGATGGGACCACGTTTTGGGAAATTCCAAAAATTGATGGACAA
GATTAATCGTATTGCCAAGGAAAACCTTCGCGGTGTGCGTGTGGTTAAATCCTTTGTGCAAGAACGGGAACAATATGTCA
AATTTAAAGAAGCTTCTAAAGAACTATTGGATTTGAATCTTTTTATCGGCTATGGCTTTTCGTTGATGCAACCAACTTTG
ATGTTAGTATCTTATTTGGCAGTTTATGTATCCATCTACATGGTTTCTGGCATGGTTGAAACAGACCCAGCAGTTATTGG
AAATATTGCTTCTTTTATGACTTATATGATGCAAATCATGTTTTCAATTATCATGGTTGGCTTTATGGGCATGCAAGCCA
GCCGTGCCTTTGTTTCTATTGGTCGTATCAAAGAAGTGCTCAATACTGAGCCAGCCATGACCTTTGAAACTGATCAAGAA
GAAGAGGTTTCAGGTAGTATTGTGTTTGAGGATGTGAGCTTTACCTATCCTAATGATGATGAACCGACCTTGCGCCATAT
TTCCTTTAGCATTGAACCTGGTCAAATGATTGGCGTTGTGGGGGCTACTGGGGCTGGAAAATCAACACTGGCACAGCTTA
TTCCTCGCTTGTTTGACCCACAAGAAGGTCAAATTTTGCTGGGAGGCAAACCGATTACCTCCCTCAGTCAAGCGACTCTT
CGTCAGACGGTTTCGATTGTGTTGCAAAAGGCTATTCTCTTTTCAGGAACTATTGCGGACAACCTTCGCCAGGGGTCAGC
GACTGCAGATGATTATGCCATGGAACGGGCAGCACGTATTGCGCAGGCCATGGAATTTATTGACCGCATGGATGGTCGTT
ATGAGAGCCAAGTTGAAGAACGAGGCAACAACTTTTCTGGTGGGCAAAAACAACGGATGTCGATTGCGCGTGGCGTCATT
AACCAGCCTAAGATTCTTGTTTTAGACGATTCAACGTCTGCCTTGGATGCCAAGTCAGAAAAATTGGTACAAGAAGCCTT
AAACAAGGAATTGAAAGGTACAACGACCGTTATTATTGCCCAAAAGATTTCTTCAGTGGTGAAGGCTGACAAGATTTTAG
TTCTTGATCAGGGTCAGCTGCTTGGCGAAGGAACTCATGCTGAATTGTTAGCCAATAATGCGGTTTATCGTGAAATTTAT
GACACACAAAAAGGTAAGGAGGAAGACTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-282)

ABC transporter (ABC_tran)

(344-493)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3P5XS20

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

35.245

100

0.367