Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | GE022_RS02615 | Genome accession | NZ_CP053790 |
| Coordinates | 515990..516586 (+) | Length | 198 a.a. |
| NCBI ID | WP_003044231.1 | Uniprot ID | - |
| Organism | Streptococcus canis strain HL_77_2 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 510990..521586
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE022_RS02590 (GE022_002575) | tnpA | 511046..511510 (+) | 465 | Protein_454 | IS200/IS605 family transposase | - |
| GE022_RS02595 (GE022_002580) | - | 511729..512250 (+) | 522 | WP_159306019.1 | transcription repressor NadR | - |
| GE022_RS02600 (GE022_002585) | - | 512366..512908 (+) | 543 | WP_093998782.1 | hypothetical protein | - |
| GE022_RS02605 (GE022_002590) | - | 513041..513811 (+) | 771 | WP_164405781.1 | formate/nitrite transporter family protein | - |
| GE022_RS02610 (GE022_002595) | pbp2b | 513915..515978 (+) | 2064 | WP_164405780.1 | penicillin-binding protein PBP2B | - |
| GE022_RS02615 (GE022_002600) | recR | 515990..516586 (+) | 597 | WP_003044231.1 | recombination mediator RecR | Machinery gene |
| GE022_RS02620 (GE022_002605) | - | 516756..517802 (+) | 1047 | WP_164405779.1 | D-alanine--D-alanine ligase | - |
| GE022_RS02625 (GE022_002610) | - | 518001..519386 (+) | 1386 | WP_003044224.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| GE022_RS02630 (GE022_002615) | - | 519473..520168 (+) | 696 | WP_093998777.1 | TIGR02206 family membrane protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21727.92 Da Isoelectric Point: 5.0690
>NTDB_id=394497 GE022_RS02615 WP_003044231.1 515990..516586(+) (recR) [Streptococcus canis strain HL_77_2]
MLYPTPIAKLIESYSKLPGIGVKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICGNLTDDDPCHICTDTSRDQT
TILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKRLITRLMDGKVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
MLYPTPIAKLIESYSKLPGIGVKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICGNLTDDDPCHICTDTSRDQT
TILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKRLITRLMDGKVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=394497 GE022_RS02615 WP_003044231.1 515990..516586(+) (recR) [Streptococcus canis strain HL_77_2]
GTGCTTTACCCAACCCCTATTGCAAAATTAATTGAAAGTTATTCCAAACTCCCAGGAATCGGGGTTAAAACGGCAACCAG
ACTTGCCTTTTACACGATTGGAATGTCTAATGAAGACGTTAATGATTTTGCTAAAAATTTATTGGCCGCTAAGAGAGAAC
TGACCTATTGTTCGATTTGCGGAAACCTTACCGATGACGATCCTTGTCACATTTGCACAGACACGAGCCGTGATCAGACG
ACCATTCTGGTAGTAGAAGATGCTAAAGATGTTTCTGCTATGGAAAAAATCCAAGAGTATCATGGCTATTATCATGTGCT
TCACGGCTTAATTTCGCCCATGAATGGTGTGGGGCCAGATGACATCAATCTTAAACGCTTAATTACCCGTTTAATGGATG
GTAAGGTGACCGAAGTTATCGTAGCTACCAATGCTACAGCTGATGGGGAGGCAACGTCCATGTATATCTCACGGGTCTTG
AAGCCAGCAGGAATCAAGGTAACCCGCTTAGCAAGAGGTCTCGCTGTTGGCTCAGATATTGAGTATGCTGATGAAGTGAC
CCTACTAAGAGCTATTGAAAATCGGACAGAGCTTTAA
GTGCTTTACCCAACCCCTATTGCAAAATTAATTGAAAGTTATTCCAAACTCCCAGGAATCGGGGTTAAAACGGCAACCAG
ACTTGCCTTTTACACGATTGGAATGTCTAATGAAGACGTTAATGATTTTGCTAAAAATTTATTGGCCGCTAAGAGAGAAC
TGACCTATTGTTCGATTTGCGGAAACCTTACCGATGACGATCCTTGTCACATTTGCACAGACACGAGCCGTGATCAGACG
ACCATTCTGGTAGTAGAAGATGCTAAAGATGTTTCTGCTATGGAAAAAATCCAAGAGTATCATGGCTATTATCATGTGCT
TCACGGCTTAATTTCGCCCATGAATGGTGTGGGGCCAGATGACATCAATCTTAAACGCTTAATTACCCGTTTAATGGATG
GTAAGGTGACCGAAGTTATCGTAGCTACCAATGCTACAGCTGATGGGGAGGCAACGTCCATGTATATCTCACGGGTCTTG
AAGCCAGCAGGAATCAAGGTAACCCGCTTAGCAAGAGGTCTCGCTGTTGGCTCAGATATTGAGTATGCTGATGAAGTGAC
CCTACTAAGAGCTATTGAAAATCGGACAGAGCTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
86.869 |
100 |
0.869 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
64.141 |
100 |
0.641 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
50.769 |
98.485 |
0.5 |