Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   GE023_RS05040 Genome accession   NZ_CP053789
Coordinates   1021870..1022052 (-) Length   60 a.a.
NCBI ID   WP_164406170.1    Uniprot ID   -
Organism   Streptococcus canis strain HL_98_2     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1016870..1027052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE023_RS05015 (GE023_005010) deoD 1016957..1017670 (-) 714 WP_003048687.1 purine-nucleoside phosphorylase -
  GE023_RS05020 (GE023_005015) - 1018230..1019039 (-) 810 WP_093999257.1 purine-nucleoside phosphorylase -
  GE023_RS05025 (GE023_005020) - 1019017..1019458 (-) 442 Protein_945 arsenate reductase family protein -
  GE023_RS05030 (GE023_005025) - 1019479..1020690 (-) 1212 WP_003048692.1 phosphopentomutase -
  GE023_RS05035 (GE023_005030) rpiA 1020769..1021452 (-) 684 WP_003048693.1 ribose-5-phosphate isomerase RpiA -
  GE023_RS05040 (GE023_005035) prx 1021870..1022052 (-) 183 WP_164406170.1 hypothetical protein Regulator
  GE023_RS05045 (GE023_005040) - 1022198..1023643 (-) 1446 WP_164406171.1 peptidoglycan amidohydrolase family protein -
  GE023_RS05050 (GE023_005045) - 1023773..1024030 (-) 258 WP_164406172.1 phage holin -
  GE023_RS05055 (GE023_005050) - 1024036..1024314 (-) 279 WP_164406173.1 hypothetical protein -
  GE023_RS05060 (GE023_005055) - 1024318..1024584 (-) 267 WP_164406174.1 hypothetical protein -
  GE023_RS05065 (GE023_005060) - 1024635..1026503 (-) 1869 WP_164406175.1 DUF859 family phage minor structural protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6931.92 Da        Isoelectric Point: 4.3455

>NTDB_id=394414 GE023_RS05040 WP_164406170.1 1021870..1022052(-) (prx) [Streptococcus canis strain HL_98_2]
MNETLYIFLEGKAKGWFEDTVNVVRKNGKIFDFVLDGEKIQPHEVVSIELFDDVIKEISS

Nucleotide


Download         Length: 183 bp        

>NTDB_id=394414 GE023_RS05040 WP_164406170.1 1021870..1022052(-) (prx) [Streptococcus canis strain HL_98_2]
ATGAATGAAACGCTGTATATTTTTTTAGAAGGAAAAGCTAAGGGGTGGTTTGAGGACACCGTGAATGTTGTTAGAAAGAA
TGGAAAGATATTTGATTTTGTATTAGATGGCGAGAAGATACAGCCTCATGAGGTGGTAAGTATTGAGTTATTTGATGATG
TTATTAAAGAGATTTCCTCTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

45.283

88.333

0.4
  prx Streptococcus pyogenes MGAS315

57.5

66.667

0.383

Multiple sequence alignment