Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | GE023_RS02665 | Genome accession | NZ_CP053789 |
| Coordinates | 524432..525028 (+) | Length | 198 a.a. |
| NCBI ID | WP_003044231.1 | Uniprot ID | - |
| Organism | Streptococcus canis strain HL_98_2 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 519432..530028
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE023_RS02645 (GE023_002645) | - | 520171..520692 (+) | 522 | WP_159306019.1 | transcription repressor NadR | - |
| GE023_RS02650 (GE023_002650) | - | 520808..521350 (+) | 543 | WP_003044240.1 | hypothetical protein | - |
| GE023_RS02655 (GE023_002655) | - | 521483..522253 (+) | 771 | WP_003044237.1 | formate/nitrite transporter family protein | - |
| GE023_RS02660 (GE023_002660) | pbp2b | 522357..524420 (+) | 2064 | WP_159306018.1 | penicillin-binding protein PBP2B | - |
| GE023_RS02665 (GE023_002665) | recR | 524432..525028 (+) | 597 | WP_003044231.1 | recombination mediator RecR | Machinery gene |
| GE023_RS02670 (GE023_002670) | - | 525198..526244 (+) | 1047 | WP_003044228.1 | D-alanine--D-alanine ligase | - |
| GE023_RS02675 (GE023_002675) | murF | 526443..527828 (+) | 1386 | WP_159304863.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| GE023_RS02680 (GE023_002680) | - | 527915..528610 (+) | 696 | WP_003044223.1 | TIGR02206 family membrane protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21727.92 Da Isoelectric Point: 5.0690
>NTDB_id=394394 GE023_RS02665 WP_003044231.1 524432..525028(+) (recR) [Streptococcus canis strain HL_98_2]
MLYPTPIAKLIESYSKLPGIGVKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICGNLTDDDPCHICTDTSRDQT
TILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKRLITRLMDGKVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
MLYPTPIAKLIESYSKLPGIGVKTATRLAFYTIGMSNEDVNDFAKNLLAAKRELTYCSICGNLTDDDPCHICTDTSRDQT
TILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKRLITRLMDGKVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=394394 GE023_RS02665 WP_003044231.1 524432..525028(+) (recR) [Streptococcus canis strain HL_98_2]
GTGCTTTACCCAACCCCTATTGCAAAATTAATTGAAAGTTATTCCAAACTCCCAGGAATCGGGGTTAAAACGGCAACCAG
ACTTGCCTTTTACACGATTGGAATGTCTAATGAAGACGTTAATGATTTTGCTAAAAATTTATTGGCCGCTAAGAGAGAAC
TGACCTATTGTTCGATTTGTGGAAACCTTACCGATGACGATCCTTGTCACATTTGCACAGACACGAGCCGTGATCAGACG
ACCATTCTGGTAGTAGAAGATGCTAAAGATGTTTCTGCTATGGAAAAAATCCAAGAGTATCATGGCTATTATCATGTGCT
TCACGGCTTAATTTCGCCCATGAATGGTGTGGGGCCAGATGACATCAACCTTAAACGTTTAATTACCCGTTTAATGGATG
GTAAGGTGACCGAAGTTATCGTAGCTACCAATGCTACAGCTGATGGGGAGGCAACGTCCATGTATATCTCACGGGTCTTG
AAGCCAGCAGGAATCAAGGTAACCCGCTTAGCAAGAGGTCTCGCTGTTGGCTCAGATATTGAGTATGCTGATGAAGTGAC
CCTACTAAGAGCTATTGAAAATCGGACAGAGCTTTAA
GTGCTTTACCCAACCCCTATTGCAAAATTAATTGAAAGTTATTCCAAACTCCCAGGAATCGGGGTTAAAACGGCAACCAG
ACTTGCCTTTTACACGATTGGAATGTCTAATGAAGACGTTAATGATTTTGCTAAAAATTTATTGGCCGCTAAGAGAGAAC
TGACCTATTGTTCGATTTGTGGAAACCTTACCGATGACGATCCTTGTCACATTTGCACAGACACGAGCCGTGATCAGACG
ACCATTCTGGTAGTAGAAGATGCTAAAGATGTTTCTGCTATGGAAAAAATCCAAGAGTATCATGGCTATTATCATGTGCT
TCACGGCTTAATTTCGCCCATGAATGGTGTGGGGCCAGATGACATCAACCTTAAACGTTTAATTACCCGTTTAATGGATG
GTAAGGTGACCGAAGTTATCGTAGCTACCAATGCTACAGCTGATGGGGAGGCAACGTCCATGTATATCTCACGGGTCTTG
AAGCCAGCAGGAATCAAGGTAACCCGCTTAGCAAGAGGTCTCGCTGTTGGCTCAGATATTGAGTATGCTGATGAAGTGAC
CCTACTAAGAGCTATTGAAAATCGGACAGAGCTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
86.869 |
100 |
0.869 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
64.141 |
100 |
0.641 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
50.769 |
98.485 |
0.5 |