Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | SA08028_RS11475 | Genome accession | NZ_CP045435 |
| Coordinates | 2261370..2261765 (-) | Length | 131 a.a. |
| NCBI ID | WP_000932692.1 | Uniprot ID | A0A641A2P1 |
| Organism | Staphylococcus aureus strain 08-028 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2256370..2266765
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SA08028_RS11450 (SA08028_01735) | thiE | 2256832..2257473 (-) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
| SA08028_RS11455 (SA08028_01736) | thiM | 2257466..2258266 (-) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| SA08028_RS11460 (SA08028_01737) | thiD | 2258250..2259080 (-) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| SA08028_RS11465 (SA08028_01738) | tenA | 2259073..2259762 (-) | 690 | WP_000396077.1 | thiaminase II | - |
| SA08028_RS11470 (SA08028_01739) | sceD | 2260286..2260981 (-) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| SA08028_RS11475 (SA08028_03190) | ssb | 2261370..2261765 (-) | 396 | WP_000932692.1 | single-stranded DNA-binding protein | Machinery gene |
| SA08028_RS11480 (SA08028_01740) | - | 2261959..2262399 (+) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| SA08028_RS11485 (SA08028_01741) | fabZ | 2262457..2262897 (-) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| SA08028_RS11490 (SA08028_01742) | murA | 2262931..2264196 (-) | 1266 | WP_000358008.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| SA08028_RS11495 (SA08028_03192) | - | 2264307..2264540 (-) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| SA08028_RS11500 | - | 2264672..2264764 (-) | 93 | WP_031864518.1 | hypothetical protein | - |
| SA08028_RS11505 (SA08028_03193) | - | 2265102..2265506 (-) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15114.16 Da Isoelectric Point: 5.2452
>NTDB_id=394122 SA08028_RS11475 WP_000932692.1 2261370..2261765(-) (ssb) [Staphylococcus aureus strain 08-028]
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=394122 SA08028_RS11475 WP_000932692.1 2261370..2261765(-) (ssb) [Staphylococcus aureus strain 08-028]
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |