Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GCU76_RS02210 Genome accession   NZ_CP045425
Coordinates   436176..437126 (+) Length   316 a.a.
NCBI ID   WP_017696153.1    Uniprot ID   -
Organism   Bacillus subtilis strain JAAA     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 431176..442126
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GCU76_RS02185 rapC 432635..433783 (+) 1149 WP_152425352.1 response regulator aspartate phosphatase RapC Regulator
  GCU76_RS02190 phrC 433767..433889 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  GCU76_RS02195 yczM 433989..434078 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  GCU76_RS02200 yczN 434160..434273 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  GCU76_RS02205 thrD 434427..435791 (-) 1365 WP_041340152.1 aspartate kinase -
  GCU76_RS02210 ceuB 436176..437126 (+) 951 WP_017696153.1 petrobactin ABC transporter permease YclN Machinery gene
  GCU76_RS02215 yclO 437119..438066 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  GCU76_RS02220 yclP 438060..438818 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  GCU76_RS02225 yclQ 438840..439793 (+) 954 WP_017696154.1 petrobactin ABC transporter substrate-binding protein YclQ -
  GCU76_RS02230 cdaE 439839..441257 (-) 1419 WP_041340166.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34856.26 Da        Isoelectric Point: 9.8375

>NTDB_id=393961 GCU76_RS02210 WP_017696153.1 436176..437126(+) (ceuB) [Bacillus subtilis strain JAAA]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIIMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=393961 GCU76_RS02210 WP_017696153.1 436176..437126(+) (ceuB) [Bacillus subtilis strain JAAA]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCATAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment