Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   FIU87_RS13405 Genome accession   NZ_CP045403
Coordinates   2553233..2554027 (-) Length   264 a.a.
NCBI ID   WP_152445057.1    Uniprot ID   -
Organism   Bacillus sp. THAF10     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2548233..2559027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU87_RS13380 (FIU87_13770) yqiS 2548494..2549393 (-) 900 WP_152445052.1 phosphate butyryltransferase -
  FIU87_RS13385 (FIU87_13775) - 2549527..2551584 (-) 2058 WP_152445053.1 sigma 54-interacting transcriptional regulator -
  FIU87_RS13390 (FIU87_13780) - 2551758..2551991 (+) 234 WP_152445054.1 DUF2627 domain-containing protein -
  FIU87_RS13395 (FIU87_13785) - 2552175..2552909 (-) 735 WP_152445055.1 glycerophosphodiester phosphodiesterase -
  FIU87_RS13400 (FIU87_13790) - 2553012..2553164 (+) 153 WP_152445056.1 YycC family protein -
  FIU87_RS13405 (FIU87_13795) spo0A 2553233..2554027 (-) 795 WP_152445057.1 sporulation transcription factor Spo0A Regulator
  FIU87_RS13410 (FIU87_13800) spoIVB 2554370..2555662 (-) 1293 WP_152445058.1 SpoIVB peptidase -
  FIU87_RS13415 (FIU87_13805) recN 2555837..2557543 (-) 1707 WP_152445059.1 DNA repair protein RecN Machinery gene
  FIU87_RS13420 (FIU87_13810) argR 2557565..2558014 (-) 450 WP_152445060.1 transcriptional regulator ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29123.60 Da        Isoelectric Point: 6.7579

>NTDB_id=393804 FIU87_RS13405 WP_152445057.1 2553233..2554027(-) (spo0A) [Bacillus sp. THAF10]
MKIKVCIVDDNRELVGLLEEYISAQEDMEVVGIAHNGQECLQLLQDKSPDVLVLDIIMPHLDGLGVLEKMRSLNLDKSPN
VIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVSNIRQVSGKSSPILKRTGASSSIRSSGSESKGKNLDANITSIIHE
IGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHRAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=393804 FIU87_RS13405 WP_152445057.1 2553233..2554027(-) (spo0A) [Bacillus sp. THAF10]
ATGAAAATTAAAGTATGTATTGTGGATGACAATCGTGAATTAGTAGGTCTTTTAGAAGAGTATATTTCAGCACAAGAGGA
CATGGAAGTGGTAGGGATTGCTCATAACGGTCAAGAGTGTCTTCAGTTGCTCCAAGATAAGAGTCCTGATGTATTAGTGC
TTGATATTATCATGCCTCATTTAGATGGATTAGGTGTGTTGGAAAAAATGCGCTCCCTAAATTTAGATAAGTCACCAAAT
GTTATCATGTTAACAGCTTTCGGTCAGGAAGATGTTACGAAAAAAGCAGTAGATCTTGGTGCTTCTTATTTTATCTTAAA
GCCTTTCGATATGGAGAATCTTGTGAGCAACATCCGTCAAGTTAGCGGAAAGTCTTCTCCTATTTTGAAGAGAACTGGTG
CATCTTCATCCATCCGTTCGTCCGGCTCAGAGTCTAAAGGGAAAAACCTAGACGCGAACATCACGAGCATTATTCATGAA
ATTGGAGTTCCTGCTCATATTAAAGGTTATCTATACTTACGAGAAGCCATTTCAATGGTATATAACGATATTGAGCTACT
CGGTTCCATTACGAAAGTTCTTTATCCGGATATTGCGAAGAAATACAATACCACTGCAAGCAGAGTCGAGCGTGCCATTC
GACATGCTATAGAAGTAGCCTGGTCACGTGGAAATATTGATAGCATTTCTTCTCTCTTTGGATACACGGTTTCTATGTCT
AAGGCAAAACCGACAAATTCAGAATTCATTGCGATGGTTGCTGATAAACTGCGCTTAGAGCATAGAGCTTCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(5-118)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

83.396

100

0.837

Multiple sequence alignment