Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   FIU87_RS08140 Genome accession   NZ_CP045403
Coordinates   1549447..1549929 (-) Length   160 a.a.
NCBI ID   WP_152444123.1    Uniprot ID   A0A5P9HL40
Organism   Bacillus sp. THAF10     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1544447..1554929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU87_RS08125 (FIU87_08410) treR 1545554..1546261 (+) 708 WP_152444121.1 trehalose operon repressor -
  FIU87_RS08130 (FIU87_08415) pepF 1546406..1548217 (+) 1812 WP_152444122.1 oligoendopeptidase F -
  FIU87_RS08135 (FIU87_08420) - 1548342..1549244 (+) 903 WP_152446473.1 chemotaxis protein -
  FIU87_RS08140 (FIU87_08425) kre 1549447..1549929 (-) 483 WP_152444123.1 YkyB family protein Regulator
  FIU87_RS08145 (FIU87_08430) - 1550003..1551517 (-) 1515 WP_253905540.1 HD-GYP domain-containing protein -
  FIU87_RS08150 (FIU87_08435) - 1551651..1552148 (-) 498 WP_152444124.1 L,D-transpeptidase family protein -
  FIU87_RS08155 (FIU87_08440) - 1552460..1552672 (-) 213 WP_152446475.1 hypothetical protein -
  FIU87_RS08160 (FIU87_08445) - 1552771..1553655 (-) 885 WP_152444125.1 metallophosphoesterase -
  FIU87_RS08165 (FIU87_08450) fadH 1553844..1554611 (+) 768 WP_152444126.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18794.36 Da        Isoelectric Point: 10.2439

>NTDB_id=393798 FIU87_RS08140 WP_152444123.1 1549447..1549929(-) (kre) [Bacillus sp. THAF10]
MHNQSYYNQNNNKSSVKPSIENLSRAIFTVNRHAKTAPDPKYLYTLKRKALEKLIMEGKATKKGLHFSKNPKNSQQQSDV
LIHAGEYFFHIPPTKEDFEKLEHLGELNDYYRNPKANMSLNIAKELLQRYTNFYPDNNQKHTTRKAYQKPVFKKLGESYL

Nucleotide


Download         Length: 483 bp        

>NTDB_id=393798 FIU87_RS08140 WP_152444123.1 1549447..1549929(-) (kre) [Bacillus sp. THAF10]
ATGCATAATCAAAGCTATTATAATCAAAATAATAACAAATCCTCCGTAAAACCTTCTATTGAAAACCTCTCACGTGCCAT
CTTTACCGTGAATCGTCATGCGAAAACTGCACCTGATCCAAAGTATCTTTATACATTAAAAAGAAAAGCTTTGGAAAAGT
TAATCATGGAAGGGAAAGCTACTAAAAAAGGATTACATTTCTCCAAAAACCCTAAAAACAGTCAACAACAATCGGATGTG
CTTATTCATGCAGGAGAATATTTCTTTCATATTCCTCCCACTAAGGAAGACTTTGAAAAGCTTGAACATCTGGGAGAGTT
GAACGATTATTACCGTAATCCTAAGGCCAACATGTCGCTTAACATTGCCAAGGAGCTACTGCAGCGCTATACCAATTTTT
ATCCAGATAATAATCAAAAGCATACTACTCGAAAAGCATACCAAAAACCTGTCTTTAAAAAGCTCGGTGAAAGCTACCTA
TAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(20-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5P9HL40

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.828

90.625

0.588

Multiple sequence alignment