Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | FIU87_RS00575 | Genome accession | NZ_CP045403 |
| Coordinates | 109826..112264 (+) | Length | 812 a.a. |
| NCBI ID | WP_152442811.1 | Uniprot ID | A0A5P9HJ56 |
| Organism | Bacillus sp. THAF10 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 104826..117264
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU87_RS00560 (FIU87_00580) | - | 107716..108177 (+) | 462 | WP_152442808.1 | CtsR family transcriptional regulator | - |
| FIU87_RS00565 (FIU87_00585) | - | 108190..108738 (+) | 549 | WP_152442809.1 | UvrB/UvrC motif-containing protein | - |
| FIU87_RS00570 (FIU87_00590) | - | 108739..109803 (+) | 1065 | WP_152442810.1 | protein arginine kinase | - |
| FIU87_RS00575 (FIU87_00595) | clpC | 109826..112264 (+) | 2439 | WP_152442811.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| FIU87_RS00580 (FIU87_00600) | radA | 112520..113896 (+) | 1377 | WP_152442812.1 | DNA repair protein RadA | Machinery gene |
| FIU87_RS00585 (FIU87_00605) | disA | 113899..114969 (+) | 1071 | WP_152442813.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| FIU87_RS00590 (FIU87_00610) | - | 115067..116158 (+) | 1092 | WP_152442814.1 | PIN/TRAM domain-containing protein | - |
| FIU87_RS00595 (FIU87_00615) | ispD | 116265..116957 (+) | 693 | WP_152442815.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 812 a.a. Molecular weight: 90637.37 Da Isoelectric Point: 6.0828
>NTDB_id=393780 FIU87_RS00575 WP_152442811.1 109826..112264(+) (clpC) [Bacillus sp. THAF10]
MMFGRFTERAQKVLALAQEEALRLSHTNIGTEHILLGLVREGEGIAAKALIALGLGPEKIQKEVENLIGRGQDSGQSIPH
YTPRAKKVIELSMDEARKLGHSYVGTEHVLLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESSGGHQGGSSNNV
NTPTLDSLARDLTAVAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKR
VMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLD
EYRKYIEKDAALERRFQPIQVDEPTIEESIQILTGLRDRYEAHHRVSITDEAIEQAVKLSDRYISDRFLPDKAIDLIDEA
GSKVRLRSFTTPPNLKELEVKLESVRNEKDAAVQSQEFEKAASLRDTEQRLREQLEETKKTWKEKQGQENSEVTVEDIAM
VVSSWTRIPVSKLAQTETDKLLNMEELLHSRVIGQDEAVKAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAL
AESIFGDEDAMIRIDMSEYMEKHATSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGR
LTDSKGRTVDFRNTLVIMTSNVGADALKRNKYVGFNVQDENQNYKDMKGKVMEELKKAFRPEFLNRIDEMIVFHSLEKKH
LKEIVTLLSDQLTKRLREQDIELELTDAAKEKISEEGYDPEYGARPLRRAIQKHVEDKLSEELLRGNIEKGKKILLDVVD
GEFAVRSAEKVK
MMFGRFTERAQKVLALAQEEALRLSHTNIGTEHILLGLVREGEGIAAKALIALGLGPEKIQKEVENLIGRGQDSGQSIPH
YTPRAKKVIELSMDEARKLGHSYVGTEHVLLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESSGGHQGGSSNNV
NTPTLDSLARDLTAVAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKR
VMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLD
EYRKYIEKDAALERRFQPIQVDEPTIEESIQILTGLRDRYEAHHRVSITDEAIEQAVKLSDRYISDRFLPDKAIDLIDEA
GSKVRLRSFTTPPNLKELEVKLESVRNEKDAAVQSQEFEKAASLRDTEQRLREQLEETKKTWKEKQGQENSEVTVEDIAM
VVSSWTRIPVSKLAQTETDKLLNMEELLHSRVIGQDEAVKAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAL
AESIFGDEDAMIRIDMSEYMEKHATSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGR
LTDSKGRTVDFRNTLVIMTSNVGADALKRNKYVGFNVQDENQNYKDMKGKVMEELKKAFRPEFLNRIDEMIVFHSLEKKH
LKEIVTLLSDQLTKRLREQDIELELTDAAKEKISEEGYDPEYGARPLRRAIQKHVEDKLSEELLRGNIEKGKKILLDVVD
GEFAVRSAEKVK
Nucleotide
Download Length: 2439 bp
>NTDB_id=393780 FIU87_RS00575 WP_152442811.1 109826..112264(+) (clpC) [Bacillus sp. THAF10]
ATGATGTTTGGTCGATTTACAGAAAGAGCTCAAAAAGTATTAGCGCTTGCTCAGGAAGAAGCCTTGCGCTTAAGTCATAC
GAATATTGGAACAGAGCATATTCTTCTTGGATTGGTAAGAGAAGGAGAAGGTATTGCGGCGAAAGCGTTGATTGCCCTTG
GCTTGGGACCAGAAAAAATACAAAAAGAAGTAGAAAATTTAATTGGTAGAGGACAAGATAGCGGACAATCCATTCCGCAC
TATACACCAAGAGCGAAAAAAGTGATCGAGCTCTCCATGGATGAAGCAAGAAAGCTTGGACATTCCTACGTTGGAACAGA
GCATGTGCTGCTTGGGTTAATTCGTGAGGGAGAAGGAGTTGCTGCCCGCGTTTTAAATAACTTGGGCGTAAGCTTAAATA
AAGCACGCCAACAAGTGTTGCAGCTACTTGGCAGCAATGAATCCTCCGGAGGTCATCAAGGTGGGTCCTCTAATAACGTG
AACACCCCTACTCTGGATAGTTTGGCAAGAGACTTGACGGCTGTTGCTCGTGAAGGAAGTCTTGATCCGGTGATTGGCCG
AAGCAAAGAAATACAACGTGTAATTGAAGTATTAAGCAGAAGAACGAAAAATAACCCAGTGTTAATTGGGGAGCCAGGCG
TTGGTAAAACAGCGATCGCAGAAGGTTTAGCACAGCAGATTGTCAACAATGAGGTGCCGGAAATCCTTCGTGATAAGCGC
GTGATGACGCTCGATATGGGAACAGTGGTTGCTGGAACGAAATATCGTGGCGAATTTGAGGACCGCCTGAAAAAGGTCAT
GGATGAAATTCGTCAGGCAGGAAACATCATTCTGTTCATTGATGAGTTGCATACGTTGATTGGAGCTGGAGGAGCAGAAG
GTGCGATTGATGCATCGAATATTTTGAAGCCTTCTCTTGCACGTGGGGAATTACAATGTATTGGTGCTACTACGTTAGAT
GAGTATCGTAAATATATCGAAAAGGATGCGGCTCTTGAACGTCGATTCCAGCCAATTCAAGTGGATGAACCAACCATTGA
AGAGTCCATTCAAATCTTAACTGGATTGCGAGATCGCTATGAAGCGCATCACCGTGTATCCATTACCGATGAAGCAATTG
AGCAGGCGGTTAAGTTATCGGATCGTTACATTTCTGACCGCTTCTTACCGGATAAAGCGATTGATTTAATTGATGAGGCA
GGCTCGAAGGTTCGTTTACGCTCCTTTACGACACCGCCAAATCTGAAAGAGCTGGAAGTAAAGCTTGAGTCCGTTCGCAA
TGAGAAGGATGCTGCTGTACAGAGTCAGGAATTTGAAAAAGCTGCTTCTTTAAGAGATACCGAGCAACGACTGCGCGAGC
AATTAGAAGAAACGAAGAAAACTTGGAAAGAAAAGCAAGGCCAAGAAAATTCAGAGGTCACAGTCGAAGATATTGCGATG
GTTGTTTCTAGCTGGACGCGTATTCCAGTATCTAAGCTAGCACAAACCGAAACGGATAAGCTTTTAAATATGGAAGAATT
GCTTCACTCTCGAGTGATTGGGCAGGATGAAGCTGTAAAAGCTGTATCCAAAGCCGTTCGTCGAGCACGTGCAGGCTTAA
AGGATCCAAAGCGCCCTATTGGTTCGTTCATCTTCCTAGGTCCTACAGGGGTAGGGAAAACGGAGCTTGCAAGAGCGTTA
GCAGAATCCATCTTCGGTGATGAGGATGCGATGATCCGCATCGATATGTCGGAGTATATGGAAAAACATGCGACCTCAAG
ACTTGTGGGGTCCCCTCCAGGATACGTAGGATATGATGAGGGTGGACAGTTAACAGAAAAGGTTCGCCGTAAGCCTTACT
CTGTTATCTTATTAGATGAAATTGAAAAAGCACACCCGGATGTATTTAACATTCTCTTGCAGGTATTAGAGGATGGCCGC
TTAACGGATTCAAAGGGTCGTACCGTTGATTTCCGCAATACACTTGTCATCATGACCTCAAACGTTGGGGCGGATGCATT
GAAACGCAACAAATATGTTGGCTTTAATGTTCAGGATGAAAATCAAAACTATAAAGATATGAAAGGGAAAGTGATGGAGG
AGCTGAAAAAAGCTTTCCGTCCAGAATTCCTTAACCGTATCGATGAAATGATTGTGTTCCATTCATTAGAGAAGAAGCAC
TTGAAGGAAATTGTTACGCTGCTATCTGATCAGTTAACTAAACGTTTGAGAGAACAGGATATTGAGCTGGAATTAACAGA
TGCTGCGAAAGAGAAAATTTCTGAAGAGGGCTATGATCCAGAGTATGGAGCTAGACCATTGCGCAGAGCGATCCAAAAGC
ATGTAGAAGATAAGTTATCTGAGGAGCTTCTACGTGGCAATATTGAAAAGGGGAAAAAGATCTTATTAGATGTGGTGGAC
GGAGAATTTGCTGTCCGCTCAGCAGAGAAAGTGAAATAA
ATGATGTTTGGTCGATTTACAGAAAGAGCTCAAAAAGTATTAGCGCTTGCTCAGGAAGAAGCCTTGCGCTTAAGTCATAC
GAATATTGGAACAGAGCATATTCTTCTTGGATTGGTAAGAGAAGGAGAAGGTATTGCGGCGAAAGCGTTGATTGCCCTTG
GCTTGGGACCAGAAAAAATACAAAAAGAAGTAGAAAATTTAATTGGTAGAGGACAAGATAGCGGACAATCCATTCCGCAC
TATACACCAAGAGCGAAAAAAGTGATCGAGCTCTCCATGGATGAAGCAAGAAAGCTTGGACATTCCTACGTTGGAACAGA
GCATGTGCTGCTTGGGTTAATTCGTGAGGGAGAAGGAGTTGCTGCCCGCGTTTTAAATAACTTGGGCGTAAGCTTAAATA
AAGCACGCCAACAAGTGTTGCAGCTACTTGGCAGCAATGAATCCTCCGGAGGTCATCAAGGTGGGTCCTCTAATAACGTG
AACACCCCTACTCTGGATAGTTTGGCAAGAGACTTGACGGCTGTTGCTCGTGAAGGAAGTCTTGATCCGGTGATTGGCCG
AAGCAAAGAAATACAACGTGTAATTGAAGTATTAAGCAGAAGAACGAAAAATAACCCAGTGTTAATTGGGGAGCCAGGCG
TTGGTAAAACAGCGATCGCAGAAGGTTTAGCACAGCAGATTGTCAACAATGAGGTGCCGGAAATCCTTCGTGATAAGCGC
GTGATGACGCTCGATATGGGAACAGTGGTTGCTGGAACGAAATATCGTGGCGAATTTGAGGACCGCCTGAAAAAGGTCAT
GGATGAAATTCGTCAGGCAGGAAACATCATTCTGTTCATTGATGAGTTGCATACGTTGATTGGAGCTGGAGGAGCAGAAG
GTGCGATTGATGCATCGAATATTTTGAAGCCTTCTCTTGCACGTGGGGAATTACAATGTATTGGTGCTACTACGTTAGAT
GAGTATCGTAAATATATCGAAAAGGATGCGGCTCTTGAACGTCGATTCCAGCCAATTCAAGTGGATGAACCAACCATTGA
AGAGTCCATTCAAATCTTAACTGGATTGCGAGATCGCTATGAAGCGCATCACCGTGTATCCATTACCGATGAAGCAATTG
AGCAGGCGGTTAAGTTATCGGATCGTTACATTTCTGACCGCTTCTTACCGGATAAAGCGATTGATTTAATTGATGAGGCA
GGCTCGAAGGTTCGTTTACGCTCCTTTACGACACCGCCAAATCTGAAAGAGCTGGAAGTAAAGCTTGAGTCCGTTCGCAA
TGAGAAGGATGCTGCTGTACAGAGTCAGGAATTTGAAAAAGCTGCTTCTTTAAGAGATACCGAGCAACGACTGCGCGAGC
AATTAGAAGAAACGAAGAAAACTTGGAAAGAAAAGCAAGGCCAAGAAAATTCAGAGGTCACAGTCGAAGATATTGCGATG
GTTGTTTCTAGCTGGACGCGTATTCCAGTATCTAAGCTAGCACAAACCGAAACGGATAAGCTTTTAAATATGGAAGAATT
GCTTCACTCTCGAGTGATTGGGCAGGATGAAGCTGTAAAAGCTGTATCCAAAGCCGTTCGTCGAGCACGTGCAGGCTTAA
AGGATCCAAAGCGCCCTATTGGTTCGTTCATCTTCCTAGGTCCTACAGGGGTAGGGAAAACGGAGCTTGCAAGAGCGTTA
GCAGAATCCATCTTCGGTGATGAGGATGCGATGATCCGCATCGATATGTCGGAGTATATGGAAAAACATGCGACCTCAAG
ACTTGTGGGGTCCCCTCCAGGATACGTAGGATATGATGAGGGTGGACAGTTAACAGAAAAGGTTCGCCGTAAGCCTTACT
CTGTTATCTTATTAGATGAAATTGAAAAAGCACACCCGGATGTATTTAACATTCTCTTGCAGGTATTAGAGGATGGCCGC
TTAACGGATTCAAAGGGTCGTACCGTTGATTTCCGCAATACACTTGTCATCATGACCTCAAACGTTGGGGCGGATGCATT
GAAACGCAACAAATATGTTGGCTTTAATGTTCAGGATGAAAATCAAAACTATAAAGATATGAAAGGGAAAGTGATGGAGG
AGCTGAAAAAAGCTTTCCGTCCAGAATTCCTTAACCGTATCGATGAAATGATTGTGTTCCATTCATTAGAGAAGAAGCAC
TTGAAGGAAATTGTTACGCTGCTATCTGATCAGTTAACTAAACGTTTGAGAGAACAGGATATTGAGCTGGAATTAACAGA
TGCTGCGAAAGAGAAAATTTCTGAAGAGGGCTATGATCCAGAGTATGGAGCTAGACCATTGCGCAGAGCGATCCAAAAGC
ATGTAGAAGATAAGTTATCTGAGGAGCTTCTACGTGGCAATATTGAAAAGGGGAAAAAGATCTTATTAGATGTGGTGGAC
GGAGAATTTGCTGTCCGCTCAGCAGAGAAAGTGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
89.396 |
99.877 |
0.893 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.688 |
98.645 |
0.49 |
| clpC | Streptococcus thermophilus LMD-9 |
46.691 |
100 |
0.478 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.45 |
100 |
0.475 |
| clpC | Streptococcus mutans UA159 |
44.604 |
100 |
0.458 |
| clpC | Streptococcus pneumoniae D39 |
48.859 |
91.749 |
0.448 |
| clpC | Streptococcus pneumoniae Rx1 |
48.859 |
91.749 |
0.448 |
| clpC | Streptococcus pneumoniae TIGR4 |
48.725 |
91.749 |
0.447 |
| clpE | Streptococcus mutans UA159 |
53.763 |
80.172 |
0.431 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.159 |
79.926 |
0.425 |
| clpE | Streptococcus pneumoniae Rx1 |
53.159 |
79.926 |
0.425 |
| clpE | Streptococcus pneumoniae D39 |
53.159 |
79.926 |
0.425 |
| clpE | Streptococcus pneumoniae R6 |
53.159 |
79.926 |
0.425 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.477 |
79.557 |
0.417 |