Detailed information NTG0393700

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: FIU95_RS02675
• Genome accession: NZ_CP045369
• Coordinates: 604586..605992 (-)
• Length: 468 a.a.
• NCBI ID: WP_152451237.1
• Uniprot ID: A0A5P9ESI9
• Organism: Microbulbifer sp. THAF38
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 599586..610992

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIU95_RS02660 (FIU95_02700)	-	599927..600472 (+)	546	WP_152451233.1	PilX N-terminal domain-containing pilus assembly protein	-
FIU95_RS02665 (FIU95_02705)	-	600496..604080 (+)	3585	WP_152451235.1	pilus assembly protein	-
FIU95_RS02670 (FIU95_02710)	-	604083..604526 (+)	444	WP_305848663.1	type IV pilin protein	-
FIU95_RS02675 (FIU95_02715)	pilR	604586..605992 (-)	1407	WP_152451237.1	sigma-54 dependent transcriptional regulator	Regulator
FIU95_RS02680 (FIU95_02720)	-	606124..607704 (-)	1581	WP_152451239.1	PAS domain-containing sensor histidine kinase	-
FIU95_RS02685 (FIU95_02725)	-	607794..609422 (+)	1629	WP_172975301.1	NAD+ synthase	-
FIU95_RS02690 (FIU95_02730)	-	609483..610433 (-)	951	WP_216646294.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 468 a.a.
• Molecular weight: 52404.90 Da
• Isoelectric Point: 5.5726

>NTDB_id=393700 FIU95_RS02675 WP_152451237.1 604586..605992(-) (pilR) [Microbulbifer sp. THAF38]
MLPLALVVDDEPDICKLITLTLQRMDVNCHTAANLAEATRLLTENRYDFCLTDLRLPDGDGLQLVEHIQSGAHRDLPIAV
ITAHGNMDTAIKALKLGAFDFVSKPVDLERLRNLAQLALRLNRERDPQLSKSSEQLLLGEAPNMRKLREQIAKVARSDAP
VYISGESGSGKELAARAIHAQGARADKPFVPINCGAIPAELMESEFFGHKKGSFTGAHKDKAGLLQSAQGGTLFLDEVAD
LPLDMQVKLLRAIQEKRIRPIGASQETPIDVRILSATHKDLAKEVNEGRFRSDLYYRINVIEISTPPLRERIEDIPLLVD
AIMQRIAKSSGEIPPGITTDAMQALQAYPFPGNVRQLENILERAFTLCEQQEIRCEDLFLERDEKPQEREAFSTAIESEI
LSEHQPENTNRFDPSQYKSLDEFLQDIEKEAIESALTKTRWNRTAAAQKLGISFRSLRYRLKKLGLET

Nucleotide

• Length: 1407 bp

>NTDB_id=393700 FIU95_RS02675 WP_152451237.1 604586..605992(-) (pilR) [Microbulbifer sp. THAF38]
ATGCTACCTCTGGCCCTGGTTGTCGACGACGAACCGGATATCTGCAAACTAATCACACTCACTCTGCAGCGCATGGATGT
GAACTGCCACACCGCGGCAAACCTCGCGGAGGCAACACGCTTGCTCACAGAGAATCGCTACGACTTCTGCCTTACCGATC
TGCGCCTGCCCGACGGCGATGGCCTGCAATTGGTGGAGCATATCCAGAGTGGCGCTCATCGAGATCTGCCCATCGCAGTG
ATTACCGCCCACGGCAATATGGATACCGCAATCAAGGCACTGAAGCTCGGTGCCTTTGATTTTGTCAGTAAACCGGTCGA
CCTGGAGCGACTGCGCAACCTCGCCCAGCTGGCCCTGCGCCTAAATAGGGAGCGCGACCCCCAGCTCAGCAAGAGCTCGG
AGCAGCTGCTTTTAGGGGAAGCGCCAAATATGCGCAAGCTGCGCGAGCAAATTGCCAAAGTCGCGCGCAGTGATGCCCCG
GTTTATATCAGTGGAGAGTCAGGCTCCGGTAAAGAGCTAGCCGCCCGTGCCATCCACGCCCAGGGGGCCCGTGCTGACAA
ACCGTTTGTACCCATTAACTGCGGAGCCATTCCCGCTGAGCTGATGGAGAGCGAGTTCTTTGGGCACAAAAAAGGCAGCT
TTACTGGCGCACATAAAGATAAGGCCGGCTTACTACAAAGTGCCCAAGGAGGCACATTATTTCTTGACGAAGTAGCCGAC
CTGCCCCTGGATATGCAGGTCAAGCTTTTGCGCGCGATACAAGAAAAACGCATCCGCCCTATCGGCGCGAGCCAGGAAAC
CCCTATCGATGTGCGTATCCTCAGTGCGACACATAAGGACCTGGCCAAAGAAGTCAATGAGGGACGCTTTCGCAGCGACC
TCTATTACCGTATCAATGTGATCGAAATCTCAACCCCGCCATTGCGCGAGCGCATTGAGGACATCCCCTTACTCGTTGAT
GCCATCATGCAGCGCATCGCCAAAAGTTCAGGCGAAATTCCTCCCGGCATCACTACCGATGCCATGCAAGCCCTACAGGC
CTATCCCTTCCCTGGGAATGTTCGCCAACTGGAAAATATTCTAGAGCGAGCCTTTACATTGTGTGAGCAACAGGAAATTC
GGTGTGAAGACCTATTTCTGGAAAGGGATGAAAAACCGCAGGAACGAGAAGCGTTTTCCACTGCGATAGAAAGTGAAATT
TTATCTGAACATCAACCGGAAAATACCAACCGCTTCGATCCAAGCCAGTACAAGTCCCTGGATGAGTTTTTACAAGATAT
TGAGAAAGAAGCGATAGAAAGCGCGCTTACTAAGACCCGCTGGAACCGTACTGCCGCGGCCCAGAAGTTGGGTATCAGTT
TTCGCTCTCTGCGTTATCGGTTGAAGAAGTTGGGGCTTGAAACCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (6-114)

• Sigma-54 interaction domain (Sigma54_activat) (138-303)

• Bacterial regulatory protein, Fis family (HTH_8) (424-464)

3D structure

• AlphaFold DB: A0A5P9ESI9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	58.836	99.145	0.583
pilR	Acinetobacter baumannii strain A118	50.959	100	0.511