Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FIU95_RS01015 Genome accession   NZ_CP045369
Coordinates   212412..212807 (+) Length   131 a.a.
NCBI ID   WP_020413651.1    Uniprot ID   -
Organism   Microbulbifer sp. THAF38     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 207412..217807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU95_RS00990 (FIU95_00995) hemC 207977..208894 (-) 918 WP_152450657.1 hydroxymethylbilane synthase -
  FIU95_RS00995 (FIU95_01000) ruvX 208984..209406 (-) 423 WP_152450659.1 Holliday junction resolvase RuvX -
  FIU95_RS01000 (FIU95_01005) - 209465..210049 (-) 585 WP_152450661.1 YqgE/AlgH family protein -
  FIU95_RS01005 (FIU95_01010) - 210085..210993 (-) 909 WP_152450663.1 energy transducer TonB -
  FIU95_RS01010 (FIU95_01015) gshB 211103..212059 (-) 957 WP_152450665.1 glutathione synthase -
  FIU95_RS01015 (FIU95_01020) pilG 212412..212807 (+) 396 WP_020413651.1 twitching motility response regulator PilG Regulator
  FIU95_RS01020 (FIU95_01025) pilH 213049..213411 (+) 363 WP_152456023.1 twitching motility response regulator PilH -
  FIU95_RS01025 (FIU95_01030) - 213428..213967 (+) 540 WP_152450667.1 chemotaxis protein CheW -
  FIU95_RS01030 (FIU95_01035) - 214125..216266 (+) 2142 WP_152450669.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14332.55 Da        Isoelectric Point: 7.2147

>NTDB_id=393696 FIU95_RS01015 WP_020413651.1 212412..212807(+) (pilG) [Microbulbifer sp. THAF38]
MELNWESLTVMVIDDSKTIRRTAETLLQKAGCTVVTATDGFDALAKIADSRPDVIFVDIMMPRLDGYQTCALIKNNSEFR
STPVVMLSSKDGLFDKAKGRVVGCDQYLTKPFSKSELLGAISAHAKPHHAA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=393696 FIU95_RS01015 WP_020413651.1 212412..212807(+) (pilG) [Microbulbifer sp. THAF38]
ATGGAGCTTAACTGGGAAAGTCTGACTGTAATGGTGATTGACGACAGTAAGACAATTCGCCGCACCGCCGAGACCTTGCT
ACAAAAAGCGGGTTGCACAGTCGTCACCGCGACAGATGGTTTTGATGCGCTGGCGAAAATCGCGGACTCCCGTCCCGATG
TTATTTTTGTCGATATCATGATGCCGCGCCTGGATGGCTACCAGACCTGTGCGCTGATTAAGAACAACAGCGAATTCCGC
TCCACCCCGGTAGTTATGTTGTCGAGCAAGGATGGTTTGTTCGATAAAGCAAAAGGCCGTGTTGTTGGCTGTGATCAATA
CCTAACTAAACCGTTTAGTAAAAGCGAACTGCTGGGTGCAATTTCCGCCCATGCAAAACCGCATCACGCAGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

94.656

0.695
  vicR Streptococcus mutans UA159

41.026

89.313

0.366

Multiple sequence alignment