Detailed information NTG0393573

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: FIV01_RS12030
• Genome accession: NZ_CP045350
• Coordinates: 2608955..2612341 (+)
• Length: 1128 a.a.
• NCBI ID: WP_152431215.1
• Uniprot ID: -
• Organism: Vibrio aquimaris strain THAF100
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2603955..2617341

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIV01_RS12010 (FIV01_12140)	erpA	2604416..2604757 (-)	342	WP_114785255.1	iron-sulfur cluster insertion protein ErpA	-
FIV01_RS12015 (FIV01_12145)	hemL	2605011..2606303 (+)	1293	WP_152431212.1	glutamate-1-semialdehyde 2,1-aminomutase	-
FIV01_RS12020 (FIV01_12150)	-	2606575..2607660 (+)	1086	WP_152431213.1	AI-2E family transporter	-
FIV01_RS12025 (FIV01_12155)	rsmC	2607738..2608760 (+)	1023	WP_152431214.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
FIV01_RS12030 (FIV01_12160)	chiS	2608955..2612341 (+)	3387	WP_152431215.1	response regulator	Regulator
FIV01_RS12035 (FIV01_12165)	-	2612927..2614600 (+)	1674	WP_152431216.1	ABC transporter substrate-binding protein	-
FIV01_RS12040 (FIV01_12170)	-	2614759..2615748 (+)	990	WP_152431217.1	ABC transporter permease	-
FIV01_RS12045 (FIV01_12175)	-	2615748..2616776 (+)	1029	WP_152431728.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127976.17 Da
• Isoelectric Point: 6.6474

>NTDB_id=393573 FIV01_RS12030 WP_152431215.1 2608955..2612341(+) (chiS) [Vibrio aquimaris strain THAF100]
MFKLYRKQRFKRLKHTLMLAFMILSITPLTAVALFFLHSHSQDLEKQSTSHLVSVRDNKKQQLLDYMTAKQSEVMGFVRS
ELAYASGGRFYGLVNAFRSLGLDIEQAREYAQQRYIKGSGDQVKTSILPQSNLYNGTERYRLLHKRYHRAYVELLRRSDF
DDILLVDLEGNVTYSTLKYDNFGTNLLTGRYKNTHLGNTFQKLIDEVTQERKTNEEYTPIITSDFRVDGKKQVAWLGAPI
IQQGYLHSYAMFRLPNNEITKLISDHKDTAEMRTLLVGQDHLSRALKIQQEDIDNSYQVVGKALSGDTAVGTYINKLGDG
IIAAYSQVSFSGINWAIIVEVPEKVAFARVHQLETIFIFAMLIAIALVILASHYLSQFITAPLLRLTWTAEKVSAGNLDT
DIVNTQRKDEIGRLALSFERMQRSIRDKIQLIEKQNMELEKNLQVIQRQNEDLQLTNRLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPMTADHRYQLDIIVKSGQRLANLVDDLLDYHKMRYGKLDIEARAVNISGAARLVMELSSHLIGNKPIRV
INQVPEEPLWVCADPQRLEQVLYNLIGNAIKYTNEGKIVISACQIDDDIRVQVVDTGQGIPAGQLEHIFEPLTQANSDNG
RYQQGAGLGLSICRQLIDLMKGHLYVSSQPMVGTTFSFTLPKASETQIEQTHSTDSLHFKAPDVIDIEPFESSSTTEDES
APLLLVVDDEPVNLRILDSFLRVEGYRIRTAQNGEEALKALNNEKPALVLLDIMMPGVSGYQVCQTIRTQFDHAQLPIIM
LTALNQPEDRVRGFDAGANDYLSKPFNKQELAARIKAHLTASKAEMRRVENQQLKSEIQQRARVEASLLETQGRLLEQLE
SAPEAIICVRDDNRIRFTNEAASLLFKRTSEQLKRSKADELISRKFLEIKKPHYCGPIDVYVDEVRQSLSADIISLPINS
GLKSMYIFDLGGGVNTTRLNHLETAVEALSSYAFEGDKAKLLELKELGDEFSDLIERGAHSEKSKQEIMREILVDSMTSG
LAYWEHVTGLSKFDFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLEFILEHCKEMTPERSHIENLHD
KLQHLLTN

Nucleotide

• Length: 3387 bp

>NTDB_id=393573 FIV01_RS12030 WP_152431215.1 2608955..2612341(+) (chiS) [Vibrio aquimaris strain THAF100]
ATGTTTAAGTTATATAGAAAACAGAGATTTAAGCGACTAAAACACACTCTCATGCTCGCCTTTATGATACTGAGCATTAC
CCCTCTCACCGCTGTCGCATTGTTTTTCCTGCACTCTCACAGTCAAGATCTTGAAAAGCAAAGTACATCCCATTTAGTTT
CGGTACGTGACAATAAAAAGCAGCAGCTTTTAGATTACATGACGGCCAAACAATCTGAAGTAATGGGTTTTGTCCGCTCA
GAGTTGGCTTACGCCAGTGGGGGGCGTTTTTATGGCTTAGTGAATGCCTTTCGCAGCTTAGGTTTGGACATAGAGCAAGC
CCGGGAATACGCACAACAGCGCTATATCAAGGGCTCAGGAGATCAAGTCAAGACCTCTATTCTTCCTCAATCTAATTTAT
ATAACGGTACCGAGAGATACCGTTTGCTTCATAAGCGTTACCATAGAGCCTATGTTGAGCTTTTAAGACGCTCTGATTTT
GATGATATTCTGTTAGTCGATTTGGAAGGTAACGTGACTTACTCTACCCTCAAATACGACAATTTTGGTACAAATCTACT
CACAGGGCGCTACAAAAACACCCATCTTGGTAATACATTTCAAAAGCTTATAGATGAAGTAACACAAGAGCGTAAAACCA
ATGAAGAATATACGCCTATCATCACCTCGGATTTCAGGGTAGATGGCAAAAAGCAAGTCGCTTGGCTTGGCGCTCCTATT
ATTCAGCAGGGCTACCTCCATAGCTATGCTATGTTCCGCTTGCCTAATAATGAAATAACCAAGCTTATTTCTGATCATAA
AGACACCGCTGAGATGAGAACTTTACTTGTTGGTCAAGACCATCTCTCCAGAGCATTGAAGATACAACAAGAAGACATTG
ATAATAGCTATCAAGTGGTTGGCAAAGCTCTTAGTGGCGATACGGCGGTTGGCACCTATATCAATAAGTTAGGTGACGGT
ATTATTGCCGCCTATAGTCAGGTTTCCTTTAGTGGTATTAATTGGGCGATTATTGTTGAAGTGCCTGAGAAGGTAGCCTT
TGCTCGCGTGCACCAACTCGAAACCATCTTTATTTTTGCCATGCTGATTGCCATTGCACTGGTGATCCTTGCCTCTCATT
ACCTTTCTCAATTTATTACAGCGCCTTTATTAAGGCTAACTTGGACAGCAGAAAAAGTATCTGCGGGAAACCTCGATACA
GACATAGTCAATACCCAGCGTAAAGATGAGATTGGCAGGCTCGCACTTAGTTTCGAGCGTATGCAGCGCTCAATACGTGA
CAAAATACAATTAATTGAAAAGCAAAATATGGAGCTTGAGAAAAACCTTCAAGTGATCCAAAGACAAAATGAAGATCTGC
AACTTACCAATCGGCTCAAAGATGAGTTTCTCGCAACTACATCTCATGAGCTCAGAACCCCACTTCATGGCATGGTAGGG
ATAGCAGAAGCGCTGATATCTGGAGCCAATGGTCCGATGACGGCCGATCATAGGTATCAACTGGATATTATCGTCAAGAG
TGGCCAACGCCTAGCAAATTTGGTTGACGACTTACTTGATTATCACAAAATGCGCTACGGAAAGCTGGATATTGAGGCAA
GAGCCGTCAATATATCGGGGGCTGCGCGCCTAGTCATGGAACTTTCTTCCCACCTAATTGGTAACAAACCCATTCGAGTG
ATTAACCAAGTGCCAGAGGAACCTTTATGGGTATGCGCAGATCCACAACGTCTAGAGCAGGTTCTTTATAACCTAATTGG
TAACGCTATCAAGTATACAAATGAAGGTAAGATTGTTATATCAGCATGCCAAATAGACGATGATATTCGTGTTCAGGTTG
TCGATACGGGACAAGGAATACCTGCGGGTCAGTTAGAACATATATTTGAGCCTCTAACTCAGGCAAACAGTGATAATGGG
CGTTATCAGCAAGGTGCTGGTCTTGGCCTCTCAATTTGCCGTCAATTGATCGATTTAATGAAGGGGCACTTGTACGTCAG
CAGCCAACCTATGGTAGGAACCACCTTTAGCTTTACGCTTCCGAAAGCATCTGAAACTCAAATAGAGCAAACTCATAGTA
CTGACAGTTTACATTTCAAAGCTCCAGATGTTATTGATATAGAGCCTTTTGAAAGCTCATCAACTACTGAAGATGAATCA
GCGCCTTTACTTCTGGTCGTTGACGATGAGCCTGTAAACTTAAGAATTCTTGACAGCTTCCTGCGCGTAGAAGGATACCG
AATAAGAACAGCTCAAAATGGAGAAGAAGCATTAAAGGCACTTAATAACGAAAAGCCAGCTCTCGTGCTGTTAGATATTA
TGATGCCAGGTGTCAGTGGTTATCAGGTTTGCCAAACCATACGCACGCAATTCGATCATGCCCAGCTACCCATTATTATG
TTAACTGCCTTAAATCAGCCTGAGGACAGGGTTAGAGGATTTGACGCTGGCGCCAATGATTACTTATCAAAGCCATTTAA
TAAACAAGAGCTTGCCGCTAGAATAAAAGCACATCTGACAGCAAGTAAAGCCGAAATGCGTAGAGTTGAGAATCAACAGC
TCAAAAGTGAAATACAACAAAGAGCTAGAGTCGAAGCCAGCTTACTTGAAACACAAGGACGTTTATTAGAACAACTAGAA
TCTGCACCTGAAGCCATCATATGTGTCAGAGATGACAATAGAATACGTTTCACCAATGAAGCGGCTTCCTTACTCTTTAA
GCGCACTTCAGAGCAGCTTAAGCGCTCGAAAGCGGATGAGCTTATCTCTCGTAAATTCCTAGAAATCAAAAAACCTCATT
ACTGTGGCCCTATCGATGTCTACGTTGATGAAGTCCGCCAATCTCTCTCTGCAGATATAATTAGCCTCCCGATCAACTCT
GGACTCAAATCAATGTATATTTTTGACCTTGGAGGTGGAGTTAACACCACGCGCTTAAATCATTTAGAAACGGCGGTAGA
AGCCCTTTCTAGTTACGCCTTTGAAGGTGATAAAGCAAAACTTCTCGAGCTCAAAGAGCTTGGAGATGAATTTAGCGATC
TTATCGAAAGAGGCGCTCATAGTGAAAAATCAAAACAAGAAATCATGCGTGAAATACTGGTTGATTCGATGACCAGCGGG
CTTGCCTACTGGGAACATGTGACCGGTCTAAGTAAGTTTGATTTTGCTGAACAAAGTGGCTTATGGCGAGTCTATTTAGA
TCGCAGTACATTGCAAACGCGAACTCTAGATAAATATTTGAGGGTAGAAACCTTACCTAAAACTCCACGCTGGAGGACTG
TATTGAGTTCATTGGAGTTCATTCTAGAGCACTGCAAAGAAATGACTCCAGAGCGAAGCCACATTGAAAATTTGCATGAT
AAACTTCAGCACTTACTAACAAACTAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• Response regulator receiver domain (Response_reg) (725-836)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (376-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	71.454	100	0.715