Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | GCS73_RS13355 | Genome accession | NZ_CP045308 |
| Coordinates | 2965593..2966012 (+) | Length | 139 a.a. |
| NCBI ID | WP_003635608.1 | Uniprot ID | D3HKN8 |
| Organism | Legionella longbeachae strain B41211CHC | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2960593..2971012
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GCS73_RS13345 (GCS73_13245) | - | 2961519..2962088 (+) | 570 | WP_012979330.1 | pilus assembly PilX family protein | - |
| GCS73_RS13350 (GCS73_13250) | - | 2962101..2965580 (+) | 3480 | WP_003635609.1 | pilus assembly protein | - |
| GCS73_RS13355 (GCS73_13255) | pilE | 2965593..2966012 (+) | 420 | WP_003635608.1 | type IV pilin protein | Machinery gene |
| GCS73_RS13360 (GCS73_13260) | - | 2966299..2966937 (-) | 639 | WP_003635606.1 | hypothetical protein | - |
| GCS73_RS13365 (GCS73_13265) | - | 2967179..2968204 (-) | 1026 | WP_003635604.1 | ABC transporter substrate-binding protein | - |
| GCS73_RS13370 (GCS73_13270) | - | 2968201..2968968 (-) | 768 | WP_003635601.1 | ABC transporter permease subunit | - |
| GCS73_RS13375 (GCS73_13275) | - | 2968965..2969789 (-) | 825 | WP_003635599.1 | ABC transporter permease | - |
| GCS73_RS13380 (GCS73_13280) | potA | 2969779..2970873 (-) | 1095 | WP_003635598.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 15313.53 Da Isoelectric Point: 7.5805
>NTDB_id=393361 GCS73_RS13355 WP_003635608.1 2965593..2966012(+) (pilE) [Legionella longbeachae strain B41211CHC]
MKQPRINGFTLIDLMIALVVMAILVTIAYPYYVGFLLKTRRSDALATLAQDQIYLERCYAQNFSYNTCTSLPAFPQISAQ
GFYSITLSNLGPTTYTLTATPRGSQTEDTTCARMTVDQANVKTAVDSSGTTQTICWNPS
MKQPRINGFTLIDLMIALVVMAILVTIAYPYYVGFLLKTRRSDALATLAQDQIYLERCYAQNFSYNTCTSLPAFPQISAQ
GFYSITLSNLGPTTYTLTATPRGSQTEDTTCARMTVDQANVKTAVDSSGTTQTICWNPS
Nucleotide
Download Length: 420 bp
>NTDB_id=393361 GCS73_RS13355 WP_003635608.1 2965593..2966012(+) (pilE) [Legionella longbeachae strain B41211CHC]
ATGAAACAACCTCGAATAAATGGTTTTACCTTAATTGATTTAATGATAGCTTTAGTGGTTATGGCGATACTGGTGACTAT
TGCCTATCCCTATTACGTGGGTTTTTTGCTAAAAACACGACGTTCTGATGCTTTGGCCACACTAGCCCAAGATCAAATCT
ATCTTGAACGCTGCTATGCACAAAATTTTTCTTATAATACATGCACATCCTTACCCGCATTTCCGCAAATATCGGCGCAA
GGATTCTACAGCATCACCCTAAGTAATCTTGGGCCGACAACATATACCCTCACGGCAACACCGCGAGGAAGCCAGACCGA
AGATACGACATGTGCACGTATGACAGTGGATCAAGCCAACGTAAAAACCGCGGTAGATTCCTCAGGAACTACGCAAACTA
TTTGTTGGAATCCTTCATGA
ATGAAACAACCTCGAATAAATGGTTTTACCTTAATTGATTTAATGATAGCTTTAGTGGTTATGGCGATACTGGTGACTAT
TGCCTATCCCTATTACGTGGGTTTTTTGCTAAAAACACGACGTTCTGATGCTTTGGCCACACTAGCCCAAGATCAAATCT
ATCTTGAACGCTGCTATGCACAAAATTTTTCTTATAATACATGCACATCCTTACCCGCATTTCCGCAAATATCGGCGCAA
GGATTCTACAGCATCACCCTAAGTAATCTTGGGCCGACAACATATACCCTCACGGCAACACCGCGAGGAAGCCAGACCGA
AGATACGACATGTGCACGTATGACAGTGGATCAAGCCAACGTAAAAACCGCGGTAGATTCCTCAGGAACTACGCAAACTA
TTTGTTGGAATCCTTCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Legionella pneumophila str. Paris |
59.574 |
100 |
0.604 |
| pilE | Legionella pneumophila strain ERS1305867 |
59.574 |
100 |
0.604 |