Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | HPC60_RS02075 | Genome accession | NZ_CP053671 |
| Coordinates | 385898..386494 (+) | Length | 198 a.a. |
| NCBI ID | WP_003131648.1 | Uniprot ID | Q9CIL6 |
| Organism | Lactococcus lactis subsp. lactis strain G121 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 380898..391494
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPC60_RS02060 (HPC60_09940) | ahpC | 381269..381832 (+) | 564 | WP_003131651.1 | alkyl hydroperoxide reductase subunit C | - |
| HPC60_RS02065 (HPC60_09945) | ahpF | 381899..383428 (+) | 1530 | WP_021722378.1 | alkyl hydroperoxide reductase subunit F | - |
| HPC60_RS02070 (HPC60_09950) | - | 383594..385759 (+) | 2166 | WP_058210887.1 | penicillin-binding transpeptidase domain-containing protein | - |
| HPC60_RS02075 (HPC60_09955) | recR | 385898..386494 (+) | 597 | WP_003131648.1 | recombination mediator RecR | Machinery gene |
| HPC60_RS02080 (HPC60_09960) | - | 386611..387660 (+) | 1050 | WP_012897191.1 | D-alanine--D-alanine ligase | - |
| HPC60_RS02085 (HPC60_09965) | murF | 387735..389057 (+) | 1323 | WP_021722376.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| HPC60_RS02090 (HPC60_09970) | - | 389227..390878 (+) | 1652 | Protein_409 | peptide ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21909.22 Da Isoelectric Point: 4.8226
>NTDB_id=393323 HPC60_RS02075 WP_003131648.1 385898..386494(+) (recR) [Lactococcus lactis subsp. lactis strain G121]
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI
Nucleotide
Download Length: 597 bp
>NTDB_id=393323 HPC60_RS02075 WP_003131648.1 385898..386494(+) (recR) [Lactococcus lactis subsp. lactis strain G121]
ATGTATTATCCTGAACCTATTGCTCGCCTGATTGAGTCGTTTTCAAAATTACCAGGGATTGGTCAAAAAACAGCGACTCG
ATTGGCTTTTTATACGATTGGCATGGAAGATCAAGATGTCAATGAATTTGCAAAAAATCTTCTGTCAGCAAAACGGGATT
TGAGTTTTTGCTCGATTTGTGGGAATTTAACAGAAAGTGATCCTTGCGCCATTTGTACCGACCCAACGCGTGATCGAACA
ACTATATTGGTCGTTGAAGAATCTAAAGATGTTCTTGCTATGGAAAAAATTCGGGAATATCGAGGACTTTATCATGTTTT
GCATGGCACGATTAGTCCAATGAATGGGATTTCTCCTGATGAAATTAATGTTAAAACATTGATTACAAGATTAATGGATT
CAGAGGTTAAAGAAGTGATTATCGCAACTAATGCCACTTCTGACGGAGAAGCAACCGCCATGTATCTGGCTCGAATGATT
AAGCCTGCAGGAATTAAAGTGACTCGCTTGGCTCGTGGATTAGCTGTAGGATCTGATATAGAATACGCAGATGAAATTAC
TTTATCAAAAGCGGTAGAGAATCGGTTGGAAATTTGA
ATGTATTATCCTGAACCTATTGCTCGCCTGATTGAGTCGTTTTCAAAATTACCAGGGATTGGTCAAAAAACAGCGACTCG
ATTGGCTTTTTATACGATTGGCATGGAAGATCAAGATGTCAATGAATTTGCAAAAAATCTTCTGTCAGCAAAACGGGATT
TGAGTTTTTGCTCGATTTGTGGGAATTTAACAGAAAGTGATCCTTGCGCCATTTGTACCGACCCAACGCGTGATCGAACA
ACTATATTGGTCGTTGAAGAATCTAAAGATGTTCTTGCTATGGAAAAAATTCGGGAATATCGAGGACTTTATCATGTTTT
GCATGGCACGATTAGTCCAATGAATGGGATTTCTCCTGATGAAATTAATGTTAAAACATTGATTACAAGATTAATGGATT
CAGAGGTTAAAGAAGTGATTATCGCAACTAATGCCACTTCTGACGGAGAAGCAACCGCCATGTATCTGGCTCGAATGATT
AAGCCTGCAGGAATTAAAGTGACTCGCTTGGCTCGTGGATTAGCTGTAGGATCTGATATAGAATACGCAGATGAAATTAC
TTTATCAAAAGCGGTAGAGAATCGGTTGGAAATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
78.283 |
100 |
0.783 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
59.596 |
100 |
0.596 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.231 |
98.485 |
0.485 |