Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GCU53_RS11200 Genome accession   NZ_CP045302
Coordinates   2408903..2409310 (-) Length   135 a.a.
NCBI ID   WP_039808301.1    Uniprot ID   A0A4Q9VC40
Organism   Azotobacter salinestris strain KACC 13899     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2403903..2414310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GCU53_RS11180 - 2404717..2405586 (-) 870 WP_152389863.1 CheR family methyltransferase -
  GCU53_RS11185 - 2405672..2407720 (-) 2049 WP_152387683.1 methyl-accepting chemotaxis protein -
  GCU53_RS11190 - 2407904..2408446 (-) 543 WP_152387684.1 chemotaxis protein CheW -
  GCU53_RS11195 pilH 2408491..2408856 (-) 366 WP_152387685.1 twitching motility response regulator PilH -
  GCU53_RS11200 pilG 2408903..2409310 (-) 408 WP_039808301.1 twitching motility response regulator PilG Regulator
  GCU53_RS11205 gshB 2409541..2410497 (+) 957 WP_152387686.1 glutathione synthase -
  GCU53_RS11210 - 2410590..2411483 (+) 894 WP_152387687.1 energy transducer TonB -
  GCU53_RS11215 - 2411565..2412137 (+) 573 WP_152387688.1 YqgE/AlgH family protein -
  GCU53_RS11220 ruvX 2412134..2412562 (+) 429 WP_152387689.1 Holliday junction resolvase RuvX -
  GCU53_RS11225 pyrR 2412606..2413115 (+) 510 WP_152387690.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  GCU53_RS11230 - 2413128..2414144 (+) 1017 WP_152387691.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14822.23 Da        Isoelectric Point: 7.2441

>NTDB_id=393275 GCU53_RS11200 WP_039808301.1 2408903..2409310(-) (pilG) [Azotobacter salinestris strain KACC 13899]
MEQHSDGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADGHPRIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIRAHVPDFVPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=393275 GCU53_RS11200 WP_039808301.1 2408903..2409310(-) (pilG) [Azotobacter salinestris strain KACC 13899]
ATGGAACAGCATTCCGACGGTTTGAAGGTCATGGTGATCGACGATTCCAAGACGATTCGTCGCACTGCGGAAACCCTGCT
GAAAAAGGTGGGATGCGAGGTCATCACCGCCGTGGACGGCTTCGATGCCCTGGCCAAGATCGCCGATGGCCATCCGCGGA
TCATTTTCGTCGATATCATGATGCCGCGCCTGGACGGCTATCAGACCTGTGCCCTGATCAAGAACAACAGTGCATTCAAG
TCCACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGACGCATTGTCGGCTCCGATCAATA
TCTGACCAAGCCCTTCAGCAAAGAAGAGCTGCTGGGCGCGATCAGGGCCCATGTGCCCGATTTCGTCCCGGTAGAGCAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Q9VC40

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.6

92.593

0.719
  vicR Streptococcus mutans UA159

41.27

93.333

0.385

Multiple sequence alignment