Detailed information NTG0392627

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GA693_RS13450
• Genome accession: NZ_CP045198
• Coordinates: 2732018..2733373 (-)
• Length: 451 a.a.
• NCBI ID: WP_218945238.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain TQ23
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 2727018..2738373

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GA693_RS13435	lptG	2728072..2729142 (+)	1071	WP_127801557.1	LPS export ABC transporter permease LptG	-
GA693_RS13440	gpmI	2729261..2730808 (+)	1548	WP_160241705.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
GA693_RS13445	-	2730832..2732001 (+)	1170	WP_160241704.1	S41 family peptidase	-
GA693_RS13450	pilR	2732018..2733373 (-)	1356	WP_218945238.1	sigma-54 dependent transcriptional regulator	Regulator
GA693_RS13455	pilS	2733444..2735012 (-)	1569	WP_104489117.1	PAS domain-containing sensor histidine kinase	Regulator
GA693_RS13460	-	2735027..2735662 (-)	636	WP_005181577.1	response regulator	-
GA693_RS13465	-	2735880..2736962 (+)	1083	WP_127799456.1	serine hydrolase	-
GA693_RS13470	thrC	2737055..2738200 (-)	1146	WP_005181581.1	threonine synthase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50617.34 Da
• Isoelectric Point: 6.7146

>NTDB_id=392627 GA693_RS13450 WP_218945238.1 2732018..2733373(-) (pilR) [Acinetobacter indicus strain TQ23]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAHSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSETEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPEADPATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=392627 GA693_RS13450 WP_218945238.1 2732018..2733373(-) (pilR) [Acinetobacter indicus strain TQ23]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGGCAGTTGCTGTCCAG
TCATCACTATGACGCCTGCATCACCGATCTGAATTTACCCGATGGCAATGGCCTGCAACTGGTTGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGGGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCACATAGCCAGGAAGCGGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTACCGATTCAGCAACTGCGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGTGGTGAATCGGGCACCGGGAAAGAAGTAGTGGCCAAT
CTGGTGCATCGCCTCAGCAACCGCAGTGACGGGCCTTTTATTGCCATCAACTGTGGCGCGATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGCCTGATTCAGTCAGCACACG
GCGGTAGCCTGTTTCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAACTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCAGTCGGTTCCGAGACGGAAATTGATGTTGATTTCCGGATTATTAGTGCCAGCCATCAGGACCTGGAAGC
GTTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGTTGCCACCGCTACGTG
AGCGTGGTCAGGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTACGCAATATCATTGAACG
CGCCATGACCTTGAGTGATGATGATGTGATTGATCTGCCACATCTGCAGACCGCACCCTTACGCAAAATGGCACCGCTGG
CCGAGCCAGAAGCTGACCCGGCAACACCGGTTACAGCTGATGCCCTGCCCGCTGCTCCGCGTAAACTTCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCACTGAATCTGACCCATTGGAACCGGACCCTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGACTAAAGAAATTCGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

• Response regulator receiver domain (Response_reg) (3-97)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.836	100	0.738
pilR	Pseudomonas aeruginosa PAK	50.334	99.557	0.501