Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GA597_RS04725 | Genome accession | NZ_CP045137 |
| Coordinates | 946690..947088 (+) | Length | 132 a.a. |
| NCBI ID | WP_011275249.1 | Uniprot ID | A0A5B2YX53 |
| Organism | Staphylococcus haemolyticus strain VB5326 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 941690..952088
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GA597_RS04695 (GA597_12090) | atpD | 941837..943249 (+) | 1413 | WP_011275243.1 | F0F1 ATP synthase subunit beta | - |
| GA597_RS04700 (GA597_12085) | - | 943270..943671 (+) | 402 | WP_011275244.1 | F0F1 ATP synthase subunit epsilon | - |
| GA597_RS04705 (GA597_12080) | - | 943799..944032 (+) | 234 | WP_011275245.1 | DUF1146 family protein | - |
| GA597_RS04710 (GA597_12075) | murA | 944137..945402 (+) | 1266 | WP_033079610.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| GA597_RS04715 (GA597_12070) | fabZ | 945442..945879 (+) | 438 | WP_011275247.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| GA597_RS04720 (GA597_12065) | - | 946059..946502 (-) | 444 | WP_011275248.1 | YwpF-like family protein | - |
| GA597_RS04725 (GA597_12060) | ssb | 946690..947088 (+) | 399 | WP_011275249.1 | single-stranded DNA-binding protein | Machinery gene |
| GA597_RS04730 (GA597_12055) | - | 947427..948134 (+) | 708 | WP_011275250.1 | transglycosylase family protein | - |
| GA597_RS04735 (GA597_12050) | tenA | 948422..949111 (+) | 690 | WP_011275251.1 | thiaminase II | - |
| GA597_RS04740 (GA597_12045) | thiD | 949104..949925 (+) | 822 | WP_016931211.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| GA597_RS04745 (GA597_12040) | thiM | 949918..950709 (+) | 792 | WP_011275253.1 | hydroxyethylthiazole kinase | - |
| GA597_RS04750 (GA597_12035) | thiE | 950711..951349 (+) | 639 | WP_011275254.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 15141.05 Da Isoelectric Point: 4.7942
>NTDB_id=392244 GA597_RS04725 WP_011275249.1 946690..947088(+) (ssb) [Staphylococcus haemolyticus strain VB5326]
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNDNILPNTSYDEDAYSFDHLEVIDVN
MLNKIVIVGRLTKKAQIFENEEVKIATFCVATERNYKDENNEIACDYIFCKAFGKTATNIESYTDQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSKNDNILPNTSYDEDAYSFDHLEVIDVN
Nucleotide
Download Length: 399 bp
>NTDB_id=392244 GA597_RS04725 WP_011275249.1 946690..947088(+) (ssb) [Staphylococcus haemolyticus strain VB5326]
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TGATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
ATGCTAAATAAAATTGTGATAGTAGGTCGATTGACCAAAAAGGCACAAATATTTGAAAACGAGGAGGTGAAAATAGCTAC
GTTCTGTGTTGCAACTGAACGTAATTATAAAGATGAAAATAATGAAATAGCTTGTGATTATATTTTTTGTAAGGCATTTG
GTAAAACAGCAACAAATATAGAATCATATACAGACCAAGGCACTTTAGTTGGTATTACAGGACAAATGAGATCTCGTAAG
TACGATAAAGATGGCCAAACGCACTTTGTGACTGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATCTAAAAA
TGATAATATTCTTCCTAACACCTCATATGATGAAGACGCTTATTCCTTTGATCACCTTGAAGTGATTGATGTTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
75.573 |
99.242 |
0.75 |
| ssb | Staphylococcus aureus MW2 |
74.809 |
99.242 |
0.742 |