Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   GA636_RS00695 Genome accession   NZ_CP045135
Coordinates   138332..139210 (-) Length   292 a.a.
NCBI ID   WP_005182159.1    Uniprot ID   N9KSY6
Organism   Acinetobacter indicus strain XG01     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 133332..144210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GA636_RS00675 miaB 134884..136338 (+) 1455 WP_104500943.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  GA636_RS00680 - 136380..137453 (+) 1074 WP_016659561.1 PhoH family protein -
  GA636_RS00685 ybeY 137473..137955 (+) 483 WP_104489012.1 rRNA maturation RNase YbeY -
  GA636_RS00690 - 138045..138335 (+) 291 WP_104470747.1 antibiotic biosynthesis monooxygenase family protein -
  GA636_RS00695 tonB2 138332..139210 (-) 879 WP_005182159.1 energy transducer TonB Machinery gene
  GA636_RS00700 - 139450..140133 (+) 684 WP_075168293.1 hypothetical protein -
  GA636_RS00705 - 140286..140999 (+) 714 WP_045796415.1 DUF3108 domain-containing protein -
  GA636_RS00710 - 141089..141664 (+) 576 WP_005182137.1 xanthine phosphoribosyltransferase -
  GA636_RS00715 - 141881..142261 (+) 381 WP_005182135.1 hypothetical protein -
  GA636_RS00720 - 142319..142495 (-) 177 WP_158649863.1 hypothetical protein -
  GA636_RS00725 wrbA 142800..143396 (-) 597 WP_104470746.1 NAD(P)H:quinone oxidoreductase -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33024.72 Da        Isoelectric Point: 9.1867

>NTDB_id=392200 GA636_RS00695 WP_005182159.1 138332..139210(-) (tonB2) [Acinetobacter indicus strain XG01]
MLKKFHFAPLTQQWWKDPLFGTVLTLAALSHLAVLTVQFVMPQQSDAAVKEIAVSLRPSATEIKDADFLAQADQQGSGTF
REAHRMSSDMPAPMIEQSAGDQQLESLERLQQQRELSFEEKVLMTTLSWQKQAAENQRKKALEELNSQFQAKAAMVASLE
AQYLQRQQNFSRQQKIKTVDGIQAKQDVAAGYLEKFRQKVEFYGNRYYPEAAKQQQLAGEVRLMVILNANGGIRAIRLIE
SSGHAMLDEAAKASVRKAAPFGAFDAKMKDISELRIIRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 879 bp        

>NTDB_id=392200 GA636_RS00695 WP_005182159.1 138332..139210(-) (tonB2) [Acinetobacter indicus strain XG01]
ATGTTAAAGAAATTTCATTTTGCACCTTTGACGCAGCAGTGGTGGAAAGATCCACTATTTGGCACCGTACTAACGCTGGC
GGCACTTTCGCATCTGGCTGTGTTAACGGTGCAATTTGTCATGCCACAGCAAAGCGATGCCGCGGTCAAGGAAATTGCGG
TCAGCTTAAGGCCAAGTGCCACCGAAATTAAGGACGCCGACTTTTTAGCACAGGCCGATCAGCAAGGTTCTGGCACCTTC
CGGGAAGCGCACCGCATGTCCAGCGATATGCCCGCACCAATGATTGAACAGAGTGCCGGTGATCAGCAGCTGGAAAGTCT
GGAGCGTTTGCAGCAGCAGCGTGAACTGAGCTTTGAAGAAAAAGTGCTAATGACTACCTTAAGCTGGCAAAAGCAGGCGG
CGGAAAACCAGCGTAAAAAAGCGCTAGAAGAATTGAACAGCCAGTTTCAGGCCAAAGCGGCGATGGTGGCCAGTCTGGAA
GCGCAGTATTTACAGCGTCAGCAAAATTTTAGCCGTCAGCAGAAAATTAAAACCGTAGATGGAATTCAGGCCAAGCAGGA
TGTCGCGGCCGGTTATCTGGAAAAATTCCGTCAGAAAGTCGAATTTTATGGTAATCGTTATTATCCGGAAGCGGCCAAGC
AGCAACAGCTGGCCGGTGAAGTGCGTTTAATGGTGATTTTAAATGCCAACGGCGGGATTCGCGCGATTCGTTTAATTGAA
AGCTCGGGACATGCCATGCTGGATGAAGCTGCTAAAGCCTCAGTACGAAAAGCTGCTCCTTTTGGTGCCTTTGATGCCAA
GATGAAAGATATTTCCGAGCTACGCATTATCCGGACCTGGCGTTTTGATCCGGCTGAGGCGGAGTTTGAGGTGCGCTAG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9KSY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.344

95.548

0.729

Multiple sequence alignment