Detailed information NTG0392150

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GA660_RS13260
• Genome accession: NZ_CP045129
• Coordinates: 2785915..2787270 (+)
• Length: 451 a.a.
• NCBI ID: WP_218945238.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain TQ04
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 2780915..2792270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GA660_RS13240	thrC	2781088..2782233 (+)	1146	WP_005181581.1	threonine synthase	-
GA660_RS13245	-	2782326..2783408 (-)	1083	WP_127799456.1	serine hydrolase	-
GA660_RS13250	-	2783626..2784261 (+)	636	WP_005181577.1	response regulator	-
GA660_RS13255	pilS	2784276..2785844 (+)	1569	WP_104489117.1	sensor histidine kinase	Regulator
GA660_RS13260	pilR	2785915..2787270 (+)	1356	WP_218945238.1	sigma-54-dependent transcriptional regulator	Regulator
GA660_RS13265	-	2787287..2788456 (-)	1170	WP_160241704.1	S41 family peptidase	-
GA660_RS13270	gpmI	2788480..2790027 (-)	1548	WP_160241705.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
GA660_RS13275	lptG	2790146..2791216 (-)	1071	WP_127801557.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50617.34 Da
• Isoelectric Point: 6.7146

>NTDB_id=392150 GA660_RS13260 WP_218945238.1 2785915..2787270(+) (pilR) [Acinetobacter indicus strain TQ04]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAHSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSETEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPEADPATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=392150 GA660_RS13260 WP_218945238.1 2785915..2787270(+) (pilR) [Acinetobacter indicus strain TQ04]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGGCAGTTGCTGTCCAG
TCATCACTATGACGCCTGCATCACCGATCTGAATTTACCCGATGGCAATGGCCTGCAACTGGTTGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGGGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCACATAGCCAGGAAGCGGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTACCGATTCAGCAACTGCGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGTGGTGAATCGGGCACCGGGAAAGAAGTAGTGGCCAAT
CTGGTGCATCGCCTCAGCAACCGCAGTGACGGGCCTTTTATTGCCATCAACTGTGGCGCGATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGCCTGATTCAGTCAGCACACG
GCGGTAGCCTGTTTCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAACTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCAGTCGGTTCCGAGACGGAAATTGATGTTGATTTCCGGATTATTAGTGCCAGCCATCAGGACCTGGAAGC
GTTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGTTGCCACCGCTACGTG
AGCGTGGTCAGGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTACGCAATATCATTGAACG
CGCCATGACCTTGAGTGATGATGATGTGATTGATCTGCCACATCTGCAGACCGCACCCTTACGCAAAATGGCACCGCTGG
CCGAGCCAGAAGCTGACCCGGCAACACCGGTTACAGCTGATGCCCTGCCCGCTGCTCCGCGTAAACTTCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCACTGAATCTGACCCATTGGAACCGGACCCTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGACTAAAGAAATTCGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

• Response regulator receiver domain (Response_reg) (3-97)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.836	100	0.738
pilR	Pseudomonas aeruginosa PAK	50.334	99.557	0.501