Detailed information NTG0392108

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GA646_RS13895
• Genome accession: NZ_CP045127
• Coordinates: 2735911..2737266 (+)
• Length: 451 a.a.
• NCBI ID: WP_267313350.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain XG03
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 2730911..2742266

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GA646_RS13875	thrC	2731083..2732228 (+)	1146	WP_005181581.1	threonine synthase	-
GA646_RS13880	-	2732322..2733404 (-)	1083	WP_127799456.1	serine hydrolase	-
GA646_RS13885	-	2733622..2734257 (+)	636	WP_005181577.1	response regulator	-
GA646_RS13890	pilS	2734272..2735840 (+)	1569	WP_160255765.1	sensor histidine kinase	Regulator
GA646_RS13895	pilR	2735911..2737266 (+)	1356	WP_267313350.1	sigma-54-dependent transcriptional regulator	Regulator
GA646_RS13900	-	2737285..2738454 (-)	1170	WP_005181572.1	S41 family peptidase	-
GA646_RS13905	gpmI	2738478..2740025 (-)	1548	WP_005181570.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
GA646_RS13910	lptG	2740144..2741214 (-)	1071	WP_104473380.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50653.37 Da
• Isoelectric Point: 6.7145

>NTDB_id=392108 GA646_RS13895 WP_267313350.1 2735911..2737266(+) (pilR) [Acinetobacter indicus strain XG03]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAHSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPGDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIHSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPETDTATLVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=392108 GA646_RS13895 WP_267313350.1 2735911..2737266(+) (pilR) [Acinetobacter indicus strain XG03]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGGCAGTTGCTGTCCAG
TCATCACTATGACGCCTGCATCACCGATCTGAATTTACCCGATGGCAATGGCCTGCAACTGGTTGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGGGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGCTGTTTAA
AGCACATAGTCAGGAAGCAGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTGCCAATTCAGCAACTACGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCAGGCACCGGGAAAGAAGTGGTGGCCAAT
CTGGTGCATCGCCTCAGTAACCGCAGTGACGGGCCTTTTATTGCCATTAACTGTGGCGCGATTCCGGGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGTCTGATTCAATCGGCGCACG
GCGGTAGCCTGTTCCTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTGAAACTGCTACGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATCAGTGCCAGCCATCAGGACCTGGAAGC
GTTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGCTGCCACCGCTACGTG
AGCGCGGTCAGGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATACACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTGCGCAATATCATTGAACG
CGCCATGACCTTGAGTGATGATGATGTGATTGATCTGCCGCATCTGCAAACTGCTCCTTTACGCAAGATGGCTCCGCTGG
CCGAGCCAGAAACCGATACTGCAACACTGGTTACAGCCGATGCCCTGCCTGCTGCTCCGCGTAAACTACCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCACTGAATCTGACTCATTGGAACCGGACCCTGGC
CGCGAAAAAACTGGGAATGTCGTTTCGTTCCCTGCGTTATCGGCTGAAGAAATTCGGGCTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (3-97)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.836	100	0.738
pilR	Pseudomonas aeruginosa PAK	50.67	99.335	0.503